Geoalkalibacter halelectricus: L9S41_08325
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Entry
L9S41_08325 CDS
T09882
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ghc
Geoalkalibacter halelectricus
Pathway
ghc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ghc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
L9S41_08325 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ghc03400
]
L9S41_08325 (recD)
Enzymes [BR:
ghc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
L9S41_08325 (recD)
DNA repair and recombination proteins [BR:
ghc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
L9S41_08325 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
Viral_helicase1
AAA_11
Helicase_RecD
UvrD-helicase
AAA_22
SH3_13
SLFN-g3_helicase
UvrD_C
AAA_16
PhoH
nSTAND3
AAA_28
Motif
Other DBs
NCBI-ProteinID:
UWZ81386
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All DBs
Position
1882296..1884149
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AA seq
617 aa
AA seq
DB search
MSDAAAVLERLPLSSMSRHFARFVAGLAQPSPGVLELAAALVSQAAEQGHVCLDLGAPGN
ISAEDGQDLSASLPAPAEWSAALRACPQVARPGEIAPLVLDDRGRLYLYRYWRHEQSLAA
EMRRRAAGRIGVTDEARLRDGLARLFGGGADTPTDWQRVAALAAVLHPLCVISGGPGTGK
TSTVVKILALLLEQAGDNPLRIALAAPTGKAAARLAEAIGQARDGLALDEGLRRRIPHEA
QTLHRLLGSGRRPGFRHHRDNPLPAEVVIVDEASMVDLSLMAALVDALDPAARLILLGDR
DQLASVEAGAVLGDLCGPAEVGFSAAFTQSACTLSGDILPQAAPDQVAPLADNVIQLRRS
YRFAPGSGIAQVAQAIKQGEGSRTLALLRDPALTDIAWRPLPSREGFTTALEPLLLEAFA
PYLQATDPGQALAAFERFRLLCALRRGPWGVESLNRLAERLLARQGLVAPQSPYYHGRPI
LVTGNDYRQGLFNGDVGLIWSDPESGGALRAFFSQGGGLRKILPSRLPGHETVFAMTVHK
SQGSEFDRVLLLLPDADTALLSRELLYTAVTRARAAVDIWADEALLSGAVGRRIQRSSGL
RDALWDTPHSAGGVKYD
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgccgccgccgtgctggagcgtttgcccctgtcctccatgagccgccatttc
gcccgcttcgtggccggactggcgcagccatcccccggtgtcctggaactggccgcggcc
ctggtcagccaggcggccgagcagggccatgtgtgcctggatctgggcgcgccgggaaat
atttcggccgaggacggccaggacttgtccgcttccctgcccgcgcccgcggaatggagt
gctgccctgcgtgcctgtccccaggtggcgcgcccaggcgaaatcgcccccctggtgctc
gacgaccggggtcggctctatctctaccgctattggcgccacgagcaaagcctggccgcg
gaaatgcggcggcgcgccgctgggcggatcggcgtcaccgacgaggcgcggctgcgcgac
gggctggcgcgtttgttcggcggcggcgcggacacccccaccgactggcagcgcgtggcg
gccctggccgcggtactccaccctctgtgcgtgatctccggtggccccggcacgggcaaa
acctccacggtggtcaagattctcgccctgttgctggaacaggcgggcgacaatcccctg
cgcatcgccctggccgcgcccaccggcaaggcggcagcgcgtcttgccgaagccatcggg
caggcgcgcgacggcctggcccttgacgagggtctgcgccggcgcattccccatgaggcc
caaaccctgcaccggctgctcggcagcggacggcggcccggttttcgccaccatcgcgac
aaccccttgcccgccgaggtggtcatcgtcgatgaggcgtccatggtcgatctgtccctc
atggcggccctggtggatgccctggatcccgccgcgcgcctgattttgctcggcgaccgc
gatcaactggcgtccgtcgaggccggggcggtgctcggcgatctctgcggacccgccgag
gtcggtttttccgccgccttcacgcaatccgcgtgcaccctaagcggcgatattctgccg
caggcggcgccggaccaggttgcgccccttgcggacaacgtgattcaactgcggcgcagc
tatcgtttcgcgccgggcagcggcatcgcccaagtggcacaagccatcaaacagggcgag
ggttcccgtaccctggcgctgctgcgcgaccccgctctaaccgacatcgcctggcgcccc
ctaccaagccgggaaggattcacgacggctcttgagccgctactgcttgaagccttcgcg
ccctacctgcaagccaccgatcccggccaggccctggcagcttttgagcgctttcgtctg
ctctgcgccctgcggcgcggcccctggggcgtggaaagcctcaatcgtctggccgaaagg
ctcttggcgcggcagggtctggtggcgccccaatccccttattatcatgggcgccccatt
ctggtgacgggcaacgactatcgccaggggctttttaacggcgatgtcgggctgatctgg
tccgaccccgagtccggcggcgccttgcgggcctttttctcccagggcggcgggctgcgc
aagattcttccgagtcgcctcccggggcatgaaacggtcttcgccatgaccgtgcataag
agtcagggcagcgagttcgatcgcgtcctgctgcttctgcccgatgccgacaccgccctg
ctcagccgcgaactgctctacaccgccgtgacgcgcgcccgcgccgccgtggacatctgg
gcggatgaggcgctgctgagcggcgcggtggggcggcgcattcagcgttcctcggggttg
cgcgatgccttgtgggataccccgcactcggccggcggggtaaaatatgattag
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