Geoalkalibacter halelectricus: L9S41_08885
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Entry
L9S41_08885 CDS
T09882
Name
(GenBank) exonuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
ghc
Geoalkalibacter halelectricus
Brite
KEGG Orthology (KO) [BR:
ghc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ghc03400
]
L9S41_08885
DNA repair and recombination proteins [BR:
ghc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
L9S41_08885
Archaeal homologous recombinant proteins
L9S41_08885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
ERp29_N
PEP-utilizers_C
Motif
Other DBs
NCBI-ProteinID:
UWZ81495
LinkDB
All DBs
Position
complement(2004614..2005861)
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AA seq
415 aa
AA seq
DB search
MYFVHVSDIHLGKTYRNSLGEVERYADFFTCLSGIVNEAVDEKIDAVIIGGDLFHVGQIL
PKTFAKTIETLQPLKDAGIPCIAIEGNHDWIHRRDSISWMEALSQMGYIKLLRPTRTEDG
GYRFDPFDEETGMGGHIEIGGVNIYGLGYIGAQAGSHVERICEAVTTENNLLLFHVGIWK
YSPVEIGNMKLEEAYPLAEKFGYVALGHGHKPYVIETPEGKPFAFNPGSPERVNFGEEKY
DKGYYFVTFENGEFHPAFRKTSPRPMFVEAIDLSGAENVEQALDMFREQVVAKVDSSGDE
RQPLLELKLVGRVGFHPFELGRERLKAVLEELVDPLHVEIKNHLSLVSSAEEGDGVKKSL
EEIEKEVLRDLIKTGSDYQGREDELIRLSIALKNAVQKGDVDGDELLALLDTEGH
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgtatttcgtacacgtatcggacatccaccttggcaaaacctaccgtaactctctcggc
gaagtggaacgttacgccgatttctttacttgcctctctggcatcgtcaatgaagcagtt
gacgaaaagattgatgcggtcattatcggcggcgacctcttccacgtcggccagatcctg
ccgaaaacttttgccaaaaccatcgaaactctccagcccttaaaggatgcaggcattccc
tgcatcgcaatcgaaggcaaccacgactggattcaccgccgtgacagtatctcgtggatg
gaagcgctgtcgcagatgggatacatcaaattgctgcgcccgacccgtacggaggacggt
ggctaccgtttcgatcctttcgacgaagaaaccggcatgggaggtcatatcgagatcggc
ggtgtcaatatctatggtcttggctatattggcgcccaggcgggcagtcatgttgaacgt
atctgtgaagcggtcaccaccgaaaacaatctgctgcttttccatgtcggcatctggaaa
tactccccggtcgagatcggcaacatgaaacttgaagaggcatacccgctggccgagaaa
ttcgggtatgtcgctcttggtcacggccacaagccctacgtcatcgaaactccggagggg
aagccattcgcattcaatcccggctcaccggaacgggtcaatttcggtgaggagaaatac
gacaaaggctactacttcgtaacctttgaaaatggtgaattccacccggcattcaggaag
acctccccgcgtccgatgtttgtcgaggcgattgatttgagcggcgccgaaaatgtcgaa
caggcactcgacatgtttcgtgagcaggttgtcgccaaggtcgacagctcgggtgatgag
cgtcaacctctgctagaactgaagctggtcggtcgcgttggctttcatcctttcgaactc
ggtcgtgaacgactgaaggcggttcttgaagagttggtcgatcctctgcatgtcgagatc
aaaaaccacctctcactggtcagcagtgccgaggagggagatggtgtcaagaaaagcctg
gaggagatcgaaaaagaggtcctgcgtgatttgatcaaaaccggcagcgactaccaggga
cgtgaagatgaattgatccggctctccatcgctctgaagaatgccgtacaaaaaggcgat
gtcgacggcgatgaactgctcgcccttctggatacggaggggcattga
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