Geoalkalibacter halelectricus: L9S41_09365
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Entry
L9S41_09365 CDS
T09882
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
ghc
Geoalkalibacter halelectricus
Pathway
ghc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ghc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
L9S41_09365 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghc03019
]
L9S41_09365 (pcnB)
Enzymes [BR:
ghc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
L9S41_09365 (pcnB)
Messenger RNA biogenesis [BR:
ghc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
L9S41_09365 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
PolyA_pol_arg_C
DUF2204
Motif
Other DBs
NCBI-ProteinID:
UWZ77912
LinkDB
All DBs
Position
2119250..2120536
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AA seq
428 aa
AA seq
DB search
MAPSDPSPHSECSPVVVPRSEHGISRKQIDEETLKVMYRLHRHGFKAYLVGGGVRDLLLG
RRPKDFDVGTDATPDQVKKLFRNCFLVGRRFRLAHVRFGRDKVVEVATFRRKPAVGEMPA
DPEDHFRFQENVFGSPCEDAFRRDFTINALFYDIENFSLIDYVGGLEDLAARRLRVIGEP
LERFTEDPVRMLRALEFCARLDFQLDEQAREGIYRAAPLIAEAAPARIREELMELFRHGV
AGAVLRSAAGMGLLEPLLAGFAGDDPTFALLERIDAGTRAGATPAEPFALAALYLSRFLR
VCPPNREAPVTEVVRLAGLVLAPHCGYFSIARAISHQARELLVGVYRLTRGRGRRGERRL
LTNPMTPYALELLSFWSEATGEFRPLVGQWRAALGAKEQPGTAPLKAAPAKRRRRPRRRK
PRSGQAPT
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggccccttctgatcccagcccgcattccgaatgttccccggtggtcgtgccgcgctcc
gagcacggtatctcccgcaaacagatcgacgaggaaacgctcaaagtcatgtaccggctg
caccgccacggcttcaaggcctacctggtgggcggcggagtgcgcgatctgctgctgggg
cgccggcccaaggatttcgacgtgggtaccgacgccacccccgatcaggtgaagaagttg
tttcgcaactgttttctggtcgggcggcgttttcgcctggcgcatgtgcgcttcggccgc
gataaggtggtggaagtggcgaccttccggcgcaagccagccgtcggggaaatgcccgcc
gatcccgaggaccactttcgttttcaggaaaacgtcttcggctcgccctgcgaggacgct
tttcggcgtgacttcaccatcaacgctctgttctacgacatcgaaaacttcagcctgatc
gactacgtggggggattggaggatctggcggcgcggcgcctgcgggtcatcggcgagccc
ctggagcgtttcaccgaggatccggtgcgcatgctgcgtgccctggagttttgcgcccgc
ctggactttcagctcgacgagcaggcgcgcgagggcatctaccgtgccgcgcccctgatc
gccgaggccgcgccggcgcgcatccgcgaggaactcatggagctcttccgccacggcgtg
gccggtgcggtgctgcgctctgccgcgggcatgggccttctggagcccctgctggcgggt
ttcgcgggcgacgatccgacctttgccctgcttgagcgcatcgacgcgggcactcgcgcg
ggcgctacgccggcggagcccttcgccctggccgctctctatctcagccgcttcctgcgg
gtctgcccaccgaaccgcgaggcgccggtcaccgaggtggtgcgcctggccgggctggtg
cttgcgccccactgcggatacttcagcatcgcccgcgccatcagccatcaggcgcgcgaa
ctgctggtcggcgtctaccgcctgacccgcggccgtggccggcgcggggagcggcgcctg
ctcaccaatcccatgacgccttatgcgctggaactgctgagcttctggagcgaggcgacg
ggggagtttcgtccgctggtcggacagtggcgtgcagctctgggcgccaaagaacagccc
ggcaccgcaccgctcaaggccgccccggccaaacgccgtcgccgcccgcggcggcgcaaa
cccaggtccgggcaagctccgacctga
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