Geoalkalibacter halelectricus: L9S41_10110
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Entry
L9S41_10110 CDS
T09882
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
ghc
Geoalkalibacter halelectricus
Brite
KEGG Orthology (KO) [BR:
ghc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ghc03032
]
L9S41_10110 (gyrB)
03400 DNA repair and recombination proteins [BR:
ghc03400
]
L9S41_10110 (gyrB)
Enzymes [BR:
ghc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
L9S41_10110 (gyrB)
DNA replication proteins [BR:
ghc03032
]
Prokaryotic type
DNA Topoisomerases
L9S41_10110 (gyrB)
DNA repair and recombination proteins [BR:
ghc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
L9S41_10110 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
HATPase_c
Toprim
GyrB_hook
HATPase_c_3
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
UWZ78053
LinkDB
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Position
complement(2275883..2278300)
Genome browser
AA seq
805 aa
AA seq
DB search
MSDKQQDLLTSLEKKDYGADSIKILEGLAAVRKRPAMYIGSTGPAGLHHLVYELVDNSID
EALAGHCSEVAVTIHLDGSVTVEDNGRGIPTDMHPTMKKSAAEVVLTVLHAGGKFDNDSY
KVSGGLHGVGVSVVNALAERLELEIRRNNTIHRQTYQRGIPDAPLREDGPTKKRGTSITF
WPDAQIFETTEFSFETLSQRLRELAFLNGGVTIHILDERSEKKHDFHYEGGIISFVEYLN
RAKTPLHAQPIYIRGEKEGVEMEVAIQYNDGYDEKIFSFANNINTHEGGTHLVGFKAALT
RTMNSYATANNLLKNIKTTISGDDLREGMTAVISVKIPDPQFEGQTKTKLGNSEIKGYVE
TLMNEKLAEFLEENPAVAKKILEKGIEAARAREAARKARDLTRRKGALEGLSLPGKLADC
QEKDPAHSEIYLVEGDSAGGSAKQGRDRRTQAILPLKGKILNVEKARFDKMLTSAEIRTL
ITAMGTGIGKDDFDIAKLRYHRIIIMTDADVDGSHIRTLLLTFFFRQMPELIERGYLYIA
QPPLYKVKRGKKEIYLKDDASLLEYLLDEGTEGATVQMEKTGKVLRGKQIIPMLRSIIEF
NNLFDKMVHKGINREVLNIFVRGKIQNGFADMVDLTPLAERLKAEEPRADFQVLQDPARI
FFILGNLRARIDQSALEALSSQEYKLLLAAYRKVEDICLDEKAFISYEGKDVVEVGDRQE
LLKHFLDRAKKGQYIQRYKGLGEMNPEQLWETTMNPEPGKRVLLQVKIEDAVEADEIFTV
LMGDQVEPRRDFIERNALNVSNLDI
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacaaacagcaggatcttctcacatccctggaaaaaaaggattacggcgccgat
agcatcaagatccttgaaggcctggcggcggttcgcaagcgtccggccatgtatatcggt
tccacgggtccggccggcctgcaccatctggtctacgagctggtggacaattccatcgac
gaggccctggccggtcactgcagcgaggtcgcggtgaccattcacctcgacggctcggtg
acggtggaggacaacggccgcggcattccgacggatatgcatccgaccatgaagaaatcc
gccgccgaggtggtgttgaccgttttgcacgctggcggcaagttcgacaacgactcctac
aaggtctccggcggtctgcacggtgtcggcgtgtcggtggtcaacgccctggccgagcgg
ctggaactggaaattcgccgcaacaacaccattcatcgccagacctatcagcgcggcatt
cccgatgcgcctctgcgcgaggacggtcccaccaagaagcgcggcaccagcatcaccttc
tggcccgatgcgcaaattttcgagaccaccgagttctcctttgaaacgctctcgcagcgc
ctgcgcgaactggcctttcttaatggcggggtgaccattcacattctcgacgagcgcagc
gaaaaaaagcacgattttcactacgaaggcggcatcatctcctttgtcgaatacctcaac
cgggccaagacgcccctgcacgcccaacccatctacatccgcggcgaaaaggaaggggta
gagatggaggtggcgatccagtacaacgacggctacgacgaaaaaatcttttccttcgcc
aacaacattaatacccacgaaggcggcacccatctggtcggcttcaaggcggcgctgacg
cgcaccatgaatagctacgccaccgccaacaacctgctcaagaacatcaagaccaccatc
tccggcgatgatttgcgtgagggcatgaccgcggtcatctcggtgaaaatccccgatccg
cagttcgaaggccagaccaagaccaagttgggcaactcggaaatcaagggctacgtggaa
accctgatgaacgagaagcttgccgaatttctcgaggaaaatcccgcggtggcgaaaaag
atcctggagaagggcatcgaggcggcgcgcgcccgcgaagcggcgcgcaaggcgcgtgat
ctgacccgccgcaagggcgccttggagggtttgtccctgcccggcaaacttgccgactgc
caggagaaggatcccgcccattcggaaatttatctggtcgagggtgactcggcgggcggc
agcgccaagcagggtcgcgaccggcgcacccaggcgattttgccgttgaagggcaagatt
ctcaacgtcgagaaggcgcgtttcgacaagatgctcacctcggccgaaatccgtaccctg
atcaccgccatgggcaccggcatcggcaaggacgatttcgacattgccaagctgcgctac
caccgcatcatcatcatgaccgacgccgacgtcgacggctcgcatatccgtaccctgctg
ctgacctttttctttcggcagatgcccgagctcatcgagcgcggctacctctacatcgcc
cagccgccgctctacaaggtcaagcgcggtaaaaaggagatttatctcaaggacgacgcc
agtctgctcgaatatctcctcgacgagggcaccgagggcgccacggtgcagatggagaaa
accggcaaggtgctgcgcggcaagcagatcatccccatgttgcgcagcatcatcgagttc
aacaacctgttcgacaagatggtgcataagggcatcaaccgcgaggtgctcaacatcttc
gtgcgcggcaagatccagaacggttttgccgacatggtcgatctgacgcccctggccgag
cggctcaaggccgaggagccgcgcgccgatttccaggtgcttcaggatccggcgcggatt
tttttcatcctcggcaatctgcgcgcgcgcatcgaccagagcgccttggaagcgctctcc
tcccaggaatacaagctgctgctcgccgcctaccgcaaggttgaggacatctgcctcgac
gaaaaagccttcatctcctatgaaggcaaggacgtggtggaggtcggcgaccgtcaggaa
ctgctcaagcatttcctcgaccgcgccaagaaggggcaatacattcagcgctacaaaggc
ttgggggagatgaaccccgagcagttgtgggaaaccaccatgaaccccgagccgggcaag
cgtgtgttgctgcaagtcaagatcgaggacgccgtggaggccgacgagatttttaccgtg
ctcatgggcgatcaggtcgaaccgcgccgcgactttatcgagcgcaacgccctcaacgta
tcgaacctggatatctaa
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