Geoalkalibacter halelectricus: L9S41_10460
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Entry
L9S41_10460 CDS
T09882
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ghc
Geoalkalibacter halelectricus
Pathway
ghc03030
DNA replication
ghc03430
Mismatch repair
ghc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ghc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
L9S41_10460 (dnaE)
03430 Mismatch repair
L9S41_10460 (dnaE)
03440 Homologous recombination
L9S41_10460 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ghc03032
]
L9S41_10460 (dnaE)
03400 DNA repair and recombination proteins [BR:
ghc03400
]
L9S41_10460 (dnaE)
Enzymes [BR:
ghc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
L9S41_10460 (dnaE)
DNA replication proteins [BR:
ghc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
L9S41_10460 (dnaE)
DNA repair and recombination proteins [BR:
ghc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
L9S41_10460 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
Motif
Other DBs
NCBI-ProteinID:
UWZ78121
UniProt:
A0ABY5ZG89
LinkDB
All DBs
Position
2354715..2358185
Genome browser
AA seq
1156 aa
AA seq
DB search
MSDIPFVHLHLHSQYSLLDGAIKIGDLVKRARDLGMPALAVTDHGNMFGAVEFYLAAKAN
DVKPIFGCEVYVATASRFDKGNARTSSDASHHLVLLAENFEGYRNLCRLVSAGYREGFYY
KPRVDWALLKECNRGLIALTACLGGEIPTLIEQGKMDDARRRCVEMAEIFDQERFFLELQ
ENFIPEQTRVNRGLKELARDLNLPLVATNDCHYLTREQAHAHEVLLCIQTGKTMDDPSRM
RFPNDEFYVKTPQEMAALFEDVPEAISNTVRIAERCQVDLDLKTYHFPQYEKPADKTLEE
VLREDSRRGLDERLAEIRKIRPISAEDEKVYRERLEVELDCINSMGFPGYFLIVADFINW
AKERDIPVGPGRGSAAGSLVAYAIRITDIDPIPYNLLFERFLNPERVSMPDIDVDFCIRG
REDVIDYVRQKYGAPNVAQIITFGTMAAKGAIRDVGRAMGLPYGEVDKIAKLVPGVLNIT
LGEALKQEPKLRDLIEKDAKVKQLFNIALALEGLTRHASTHAAGVVVTPNDLTEYLPLYV
DPKAGGQVTQFSMNYVEKIGLVKFDFLGLKTLTVIDNAVRLIRAGKDPAFDLNLIGDDDP
KTYELLSRGETTGVFQLESSGMKELLIKLKPSCFEDIIAVCALYRPGPLGSGMVDDFILR
KHGKKKITYDFPQLEPILKDTYGVIVYQEQVMLIAQVLANYSLGGADLLRRAMGKKKAEE
MAKERQKFLAGARDNNLDEKKAGAVFDLMEMFAAYGFNKSHSAAYALVAYHTAYLKAHYP
VEFMAALLTEDMENTDKVVKNIAEVRSMGIEVLPPDINASERSFTVHENAIRFGLGAVKG
VGSAALEIITEVRGEAPFSSLHDFCERVNLQKVNKKVIEALIKCGAFDSLGGRRAQYMEA
LEDAMEAGQRVQRERAMGQESLFGMEEIVSAGGNGHGQLPDLEEWPDKVLLSFEKEALGF
FITGHPLARYRDTIKRFATCDASSLGDRADKEEVKVCGIVSAVKELTTKKGDRMAFATLE
DLSGLVELVLFPEVYQAGADLIKGEEPILVSGSLDVGEETCKLMVSEVIALRDVQERQTK
KVHFRLSSPGLDEEHLRGLKSIIKQFPGRCGSFIHVVVPNECEAVVGLPDILNVAASDEL
MEATEKLFGYQVVTFE
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacatccccttcgttcacttgcatctgcactcccaatacagcctgcttgacggt
gccatcaagatcggcgacctggtcaagcgcgcgcgcgatttggggatgccggctctggcc
gtcaccgaccacggcaacatgttcggcgccgtcgagttctaccttgcggccaaggccaac
gacgtcaagcccattttcggctgcgaggtctatgtcgccacggcctcgcgtttcgacaag
ggcaatgcccgcacctcatccgatgcctcccatcacctggtgctgctggcggaaaatttt
gagggttatcgcaacctgtgccgcctggtgtccgccggctaccgggaaggtttttattac
aagccgcgtgtcgactgggccctgctcaaagagtgcaaccgcggcctgatcgccctgacc
gcctgcctgggcggagaaatccccacgctcatcgagcagggcaagatggacgacgcccgg
cgtcgctgcgtcgagatggccgagatattcgaccaggagcggttttttctggagttgcag
gagaacttcatccccgagcagacccgggtcaaccgtgggctcaaggaacttgcccgggat
ctgaatctgcccctggtggcgaccaacgattgccattatctcacccgcgaacaggcgcac
gcccacgaggtcttgctgtgcattcagaccggcaagaccatggacgatcccagccgcatg
cgctttcccaacgacgaattctacgtcaaaaccccccaggaaatggccgcgctgttcgag
gatgtgccggaggccatcagcaatacggtgcgtatcgccgagcgctgccaggtcgatctg
gatctcaagacctatcattttccccagtatgaaaagcccgccgataagacccttgaggag
gtcttacgcgaggactcccggcgcgggctggatgagcgcctggcggagatccgcaagatt
cgccccatcagcgccgaggatgaaaaggtctatcgcgagcgtctcgaggtcgaactcgac
tgcatcaactccatgggatttccggggtatttcctcatcgtggccgatttcatcaattgg
gccaaggagcgggatatccccgtcggtcccgggcgcggctcggcggccggatcgctggtc
gcctacgccattcgcatcaccgacatcgaccccatcccctacaatctgctcttcgagcgc
tttctcaaccccgagcgcgtatccatgcccgatatcgatgtcgacttctgcatccgcggg
cgtgaggacgtcatcgattacgtgcgccagaaatacggcgcacccaacgtggcgcagatc
atcactttcggcaccatggctgccaagggcgccatccgtgacgtggggcgcgccatgggc
ctgccctacggcgaggtggacaagatcgccaagctcgtgccgggggtgctcaatatcacc
ctcggcgaggcgctcaagcaagagcccaagctgcgcgatctgatcgagaaggacgccaag
gtcaagcaactcttcaacatcgccctggccctggagggattgacgcgccacgcctcgacc
cacgccgccggcgtggtggtcacgcccaacgacctcaccgaatacctgcccctgtacgtc
gatcccaaggccggcggtcaggtgacccagttctccatgaattacgtggagaaaatcggg
ctggtgaagttcgactttttgggtctcaagaccctgaccgtcatcgataacgcggtgcgc
ctgattcgcgccggcaaggacccggctttcgatctcaacctcatcggcgacgacgacccc
aagacctatgaattgctctcgcgcggcgagaccacgggcgtgtttcagctcgaatcctcg
gggatgaaggaactgctgatcaagctcaagccatcctgtttcgaggacatcatcgcggta
tgcgccctctatcgtcccgggcccctgggctcgggcatggtcgacgacttcattctgcgc
aagcacggcaagaagaagatcacctacgactttccgcagctcgagccgatcctcaaggac
acctacggcgtcatcgtctaccaggaacaggtcatgctcatcgctcaggtgctggccaac
tacagcctgggcggcgccgatttgctgcggcgcgccatgggcaagaaaaaagccgaggaa
atggccaaggagcggcagaagtttctcgccggcgcccgcgacaacaacctcgacgagaag
aaagccggcgcggtgttcgatctgatggagatgttcgccgcctacggtttcaacaagtcg
cactcggccgcctatgccctggtggcctaccacaccgcctacctcaaggcccactatccg
gtggagttcatggccgcgctgctcaccgaggacatggagaacaccgacaaggtggtgaaa
aacatcgccgaggtgcgctccatgggcatcgaggtgctgcctcccgacatcaacgcctcg
gaacgcagcttcaccgtgcacgaaaacgccatccgcttcggcctgggggccgtcaagggc
gtgggctcggcggccctggagatcatcaccgaggtgcgcggcgaggcgccgttcagctcc
ctgcacgatttctgcgaacgcgtcaacctgcagaaggtcaacaaaaaggtgatcgaggcc
ctgatcaagtgcggtgcctttgactccctcggtggccgccgggcgcagtatatggaagcg
ctggaagatgccatggaggcgggccagcgggtgcagcgcgaacgcgccatggggcaggaa
tcgctcttcggcatggaagagatcgtcagtgccgggggcaatggccacggccaactgccc
gatctcgaggaatggccggacaaggttttgctcagcttcgagaaggaagccctgggattt
ttcatcaccggccatcccctggcgcgctaccgcgacaccatcaagcgttttgccacctgc
gacgcatcctctctgggcgatcgcgccgacaaggaagaggtcaaggtgtgcggcatcgtt
tcggcggtcaaggagctgaccaccaagaagggtgaccgcatggcctttgccaccctggag
gatctcagcgggttggtggagctggtgctgttccccgaggtctatcaggccggcgcggat
ttgatcaaaggcgaggagccgattttggtcagcggctccctcgacgtgggcgaggaaacc
tgtaagctgatggtaagcgaggtcatcgccctgcgcgacgtgcaggagcgccagaccaag
aaggtgcattttcgcctgagttcaccgggactcgacgaagagcatctgcgagggctcaaa
agcattatcaagcagtttcccggtcgctgcggctcctttatccacgtggtcgtgcccaac
gagtgcgaggcggtggtcgggctgcccgacatactcaatgtcgccgccagcgatgaattg
atggaggccacggaaaaactcttcggctaccaggtcgtcaccttcgagtga
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