KEGG   Geoalkalibacter halelectricus: L9S41_10800
Entry
L9S41_10800       CDS       T09882                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
ghc  Geoalkalibacter halelectricus
Pathway
ghc03030  DNA replication
ghc03430  Mismatch repair
ghc03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ghc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    L9S41_10800
   03430 Mismatch repair
    L9S41_10800
   03440 Homologous recombination
    L9S41_10800
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ghc03032]
    L9S41_10800
   03400 DNA repair and recombination proteins [BR:ghc03400]
    L9S41_10800
Enzymes [BR:ghc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     L9S41_10800
DNA replication proteins [BR:ghc03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     L9S41_10800
DNA repair and recombination proteins [BR:ghc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     L9S41_10800
SSDB
Motif
Pfam: RNase_T Rv2179c-like DNA_pol_A_exo1 RNase_H_2
Other DBs
NCBI-ProteinID: UWZ78187
LinkDB
Position
2430198..2430866
AA seq 222 aa
MLPNHCVVLDLETTGTSPVHNRIIEIGLCEIENGQAVAEWSSLVNPQTRISPFIAQYTGI
SDALVADAPTFEELAADLHRRLSGRVLIAHNARFDNGFLKNEFARLGIAFQEKTLCTLKL
SRRLYPQHRRHGLDALIERHGLQAEDRHRALGDVRMTWEFLRKALAENPPETVEKELQRI
LGKSVDLRTRALSHCSEDHRTHQDQRLSQQIHQVVSCSGDVI
NT seq 669 nt   +upstreamnt  +downstreamnt
atgctgcccaatcactgcgttgttcttgatctcgaaaccaccggcaccagcccggtgcac
aaccgcatcatcgaaatcggcctgtgcgaaatcgaaaacggccaggccgtggccgaatgg
tcgagtctggtgaatccgcagacgcgtatttcgccatttatcgcccaatacaccggcatc
agcgacgcgctggtggccgatgcgccgacctttgaggaactggccgcggatctgcatcgc
cgcctgagcggcagggtgctgatcgcccataacgcgcgcttcgacaacggttttctcaag
aacgagttcgcccgcctggggattgccttccaggaaaaaaccctctgcaccctcaaactc
tcgcgccgcctctatccccaacatcgccgccatgggctcgatgcccttattgagcgtcac
ggtttgcaggccgaggaccgccaccgcgccctgggcgatgtacgcatgacctgggagttt
ctgcgtaaggcgctggcggaaaatccgcctgaaacagtggaaaaggaactgcaacgcatt
ctcggcaaaagtgtggatctgcgcacccgcgcgctttcgcattgttccgaagatcatcgc
acgcaccaggatcagcgtctctctcagcagatccatcaagtggtgtcttgttctggagat
gtaatttga

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