Geoalkalibacter halelectricus: L9S41_11530
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Entry
L9S41_11530 CDS
T09882
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ghc
Geoalkalibacter halelectricus
Pathway
ghc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ghc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
L9S41_11530 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghc03019
]
L9S41_11530 (groL)
03110 Chaperones and folding catalysts [BR:
ghc03110
]
L9S41_11530 (groL)
03029 Mitochondrial biogenesis [BR:
ghc03029
]
L9S41_11530 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ghc04147
]
L9S41_11530 (groL)
Enzymes [BR:
ghc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
L9S41_11530 (groL)
Messenger RNA biogenesis [BR:
ghc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
L9S41_11530 (groL)
Chaperones and folding catalysts [BR:
ghc03110
]
Heat shock proteins
HSP60 / Chaperonin
L9S41_11530 (groL)
Mitochondrial biogenesis [BR:
ghc03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
L9S41_11530 (groL)
Exosome [BR:
ghc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
L9S41_11530 (groL)
Exosomal proteins of other body fluids (saliva and urine)
L9S41_11530 (groL)
Exosomal proteins of breast cancer cells
L9S41_11530 (groL)
Exosomal proteins of colorectal cancer cells
L9S41_11530 (groL)
Exosomal proteins of bladder cancer cells
L9S41_11530 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
SHOCT-like_DUF2089-C
Motif
Other DBs
NCBI-ProteinID:
UWZ78321
UniProt:
A0ABY5ZM51
LinkDB
All DBs
Position
complement(2581084..2582733)
Genome browser
AA seq
549 aa
AA seq
DB search
MAAKEIKFGQDARAKILTGVNTLANAVKVTLGPKGRNVVIEKSFGAPLITKDGVTVAKEI
ELEDKFENMGVQLVKEVASKTSDVAGDGTTTATVLAQAVYREGVKLVTAGHNPMEIKRGI
DKAVEACVGALKELSKPIKDHKEIAQVGTISANGDATIGNILAEAMEKVGKEGVITVEEA
KSMETTLETVEGMQFDRGYLSPYFVTDAERMETVIEDALILIHDKKVSNMRDLLPVLEPV
AKQGRPLLIIAEDVEGEALATLVVNKLRGTLNVAAVKAPGFGDRRKAMLEDIAVLTGGKV
ISEEIGFKLENATLDMLGRAKRIVIDKDNTTIIDGAGAEADIEGRVKQIRAQIEETTSDY
DREKLQERLAKLVGGVAVVKVGAATETEMKEKKARVEDALHATRAAVEEGIVPGGGVAMI
RVIAALDNLKVEGEQAFGVKIVRRALEEPLRQISANAGMEGSIVVNKVMGEKGAYGFDAA
TDTYCDMLEAGIIDPTKVARYALQNAASVAGLMLTTEACVAEAPKGEEKMPAMPGGMGGM
GGMGGMDMM
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaaaagaaatcaaattcgggcaggacgcccgcgccaagattctcaccggggtc
aacaccctggccaacgccgtcaaggtgactctcggtcccaagggccgcaacgtggtcatc
gaaaaatccttcggcgctcccctgatcaccaaggacggcgtcaccgtcgccaaggaaatc
gagcttgaggacaagttcgagaacatgggcgtgcagttggtcaaggaagtcgcctccaag
acctccgacgtcgccggcgacggcaccaccaccgccaccgtgctcgcccaggccgtctat
cgtgaaggcgtcaagctggtcaccgccggccacaatcccatggaaatcaagcgcggcatc
gacaaggccgtggaagcctgcgtcggcgccctgaaagaactgtccaagcccatcaaggac
cacaaggagatcgcccaggtcggcaccatctccgccaacggcgacgccaccatcggcaac
atcctcgccgaagccatggagaaagtcggcaaggaaggcgtcatcaccgtcgaggaagcc
aagtccatggaaaccaccctggagaccgtcgagggcatgcagttcgaccgcggctacctc
tccccctacttcgtcaccgacgccgagcgcatggagaccgtcatcgaggacgccctgatc
ctcatccatgacaagaaggtcagcaacatgcgcgacctgctgccggtgctcgagccggtg
gccaagcagggccgtcccctgctgatcatcgccgaggacgtcgagggcgaggcgctggcc
accctggtggtcaacaagctgcgcggcaccctcaacgtggccgccgtcaaggcccccggc
ttcggcgatcgccgcaaggccatgcttgaagacatcgccgtgctcaccggcggcaaggtg
atcagcgaagagatcggtttcaagctcgagaacgccaccctcgacatgctcggtcgcgcc
aagcgcatcgtcatcgacaaggacaacaccaccatcatcgacggcgccggtgccgaggcc
gatatcgagggtcgcgtcaagcagatccgcgcacagatcgaggaaaccaccagcgactat
gatcgtgagaagctccaggagcgcctcgccaagctggtcggcggcgtcgccgtggtgaaa
gtcggtgccgcaaccgaaaccgaaatgaaggaaaagaaagcccgcgtcgaggacgccctg
cacgccacccgtgcggccgtcgaagagggcatcgtccctggcggcggcgtggccatgatc
cgcgtcatcgcggccctggacaacctcaaggtcgaaggcgagcaggctttcggcgtcaag
atcgtacgccgcgcccttgaggagcccctgcgtcagatttccgccaacgccggtatggaa
ggctccatcgtcgtcaacaaggttatgggcgaaaaaggtgcctatggcttcgacgctgcg
accgacacctactgcgacatgctcgaagcgggtatcatcgaccccaccaaggttgcccgc
tatgccctgcagaacgccgcctccgtggccggcttgatgctgaccaccgaagcctgcgtg
gccgaagcgcccaagggcgaagaaaagatgcccgcaatgcccggcggtatgggcggcatg
ggcggcatgggcggcatggacatgatgtaa
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