Geoalkalibacter halelectricus: L9S41_11715
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Entry
L9S41_11715 CDS
T09882
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
ghc
Geoalkalibacter halelectricus
Pathway
ghc02020
Two-component system
ghc02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ghc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
L9S41_11715
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
L9S41_11715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ghc03021
]
L9S41_11715
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
ghc02035
]
L9S41_11715
Transcription machinery [BR:
ghc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
L9S41_11715
Bacterial motility proteins [BR:
ghc02035
]
Flagellar system
Flagellar assembly proteins
Stator
L9S41_11715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
HTH_23
KORA
GerE
UPF0122
PhyR_sigma-like
HTH_37
NSs
Sigma70_ECF
Snapin_Pallidin
Cep57_MT_bd
Motif
Other DBs
NCBI-ProteinID:
UWZ78356
LinkDB
All DBs
Position
complement(2615680..2616426)
Genome browser
AA seq
248 aa
AA seq
DB search
MNPPDLYYQPPSDHRTRLVEEHLPLVNFLVERMITQVPASLTREDLASAAMMGLLDAANR
FDPSRGILFKTFAEHRMRGAMLDEARRTDWFSRSLRDKQTRLTRALEQLERELGRSPEEH
EVAAALELDLESYRDLLTEVSHLGCVSLHQTIDEYEEGRSFIDNLPDPQAATPLENVERR
ELTRELAEHLERLSEKERLVISLYYYEELTQKEIAEVLAVTEGRVSQLHSQALHKLKARL
SSTIKRRR
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctcccgatctctactatcaaccgccgagcgatcatcgcacccgcctggtcgag
gagcatctgcccctggtcaatttcctggtggagcgcatgatcacccaggtgccggcgtcg
ttgacccgcgaggatttggccagcgccgccatgatgggcctgctcgacgcggccaaccgc
tttgatccgagtcgcgggattttgttcaagaccttcgccgagcaccgcatgcgcggcgcc
atgctcgacgaggcgcgccgcaccgactggttctcgcgctccctgcgcgacaagcagacg
cgtctgacccgggccctggagcagcttgagcgtgagttgggccgctcgcccgaggagcat
gaggtcgccgcggccctggagctggatctggagagctaccgggatctgcttaccgaggtg
agccacctgggctgcgtgagcctgcatcagaccatcgacgagtacgaggaggggcgcagc
ttcatcgacaacctgcccgatccccaggccgcaacgcccctggaaaatgtcgagcggcgc
gagctgacccgcgagctggccgagcatctggagcgactctcggagaaggagcgcctggtc
atctccctgtactactacgaagagctgacccagaaggaaatcgccgaggtgctcgcggtg
accgaggggcgtgtttcgcaactgcacagccaggccctgcacaagctcaaggcgcgcctg
agcagcaccatcaagcggcggcgctga
DBGET
integrated database retrieval system
