Geoalkalibacter halelectricus: L9S41_13490
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Entry
L9S41_13490 CDS
T09882
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
ghc
Geoalkalibacter halelectricus
Brite
KEGG Orthology (KO) [BR:
ghc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ghc03032
]
L9S41_13490
03036 Chromosome and associated proteins [BR:
ghc03036
]
L9S41_13490
03400 DNA repair and recombination proteins [BR:
ghc03400
]
L9S41_13490
DNA replication proteins [BR:
ghc03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
L9S41_13490
Chromosome and associated proteins [BR:
ghc03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
L9S41_13490
DNA repair and recombination proteins [BR:
ghc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
L9S41_13490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-CCDC81_euk_2
HU-CCDC81_euk_1
HU-HIG
HU-CCDC81_bac_2
HTH_78
Motif
Other DBs
NCBI-ProteinID:
UWZ78684
UniProt:
A0ABY5ZIF2
LinkDB
All DBs
Position
complement(2978137..2978427)
Genome browser
AA seq
96 aa
AA seq
DB search
MTKSELIEQLAVENVALSKKEAELVVNTIFDSISQALIGGDRVEIRGFGSFTIRERDARE
ARNPKSGDLVKIPPKKTPFFKTGKELRERVNNGTCC
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaaagtgaattgattgagcagttggcggtcgaaaacgtggccttgagtaaaaaa
gaggctgaattggtcgtcaacaccattttcgacagcatcagccaggcgctcattggaggg
gatcgcgttgagattcgcggctttggctcgtttaccatccgtgagcgcgatgctcgcgag
gcacgcaatcccaaaagcggcgatttggtgaaaattccgcccaagaagacgccgttcttc
aagaccggtaaggaattgcgtgagcgggtcaacaacggaacttgctgttga
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