Geoalkalibacter halelectricus: L9S41_13535
Help
Entry
L9S41_13535 CDS
T09882
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ghc
Geoalkalibacter halelectricus
Pathway
ghc03410
Base excision repair
ghc03430
Mismatch repair
ghc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ghc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
L9S41_13535 (recJ)
03430 Mismatch repair
L9S41_13535 (recJ)
03440 Homologous recombination
L9S41_13535 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ghc03400
]
L9S41_13535 (recJ)
DNA repair and recombination proteins [BR:
ghc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
L9S41_13535 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
L9S41_13535 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
L9S41_13535 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
UWZ78692
LinkDB
All DBs
Position
complement(2987546..2989267)
Genome browser
AA seq
573 aa
AA seq
DB search
MEPISRRRWLPRQAHQVLAQITQLGAALNLSPLCARVLAGRGLVDPEQAGVFLQARLAAL
PDPGLLRSMDRAAERLARAVREQHPVEVHGDYDVDGISAAALLVESLRAMGAQVDFHIPL
RLRDGYGLSAEALRAAQARGKHLVVSVDCGISAVAEARLAAELGLDLIITDHHQPPQELP
RALALINPHLPDDTFPDKHLAGVGVAFFLALAVRRELRAQGWFHSRPEPDLKQVLDLVAL
GTIADIVPLTGVNRILTRAGLDLMAQDRRPGLAALRQVAGVREINCGAVGFQLAPRLNAA
GRLEDAAAAVRLLLTEDAQEARAIAEQLDACNRQRQAIEAETFSQALERLAKLDQPQRNS
IVLADERWHPGVIGIVASRLVERFHRPTVLIALEQGRGKGSARSIRGFHLYQALERCSTE
LQGFGGHEYAAGLTLSAHQVESFDARFENVAHEWLDEEALLPQMLHDGEVELTAFAQADV
AELAALAPFGPGNPEPLFRVNGAVFERPRCVGRDHLQFQLRQDDLSLPCIAFGAAARWQG
IKGRVDVLCTPQINRWQGRDSVQLRVKDLRENG
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atggagcccataagccgacgccgctggctgccccgccaagcccatcaggtcttggcccag
attactcagctgggcgcggctttgaatctctcgcccctgtgcgcgcgggttctggctgga
cgcggcctggtcgatcccgagcaggcgggggtgtttttgcaggcgcgcctggcggcgctg
cccgatccgggcttgctccgtagcatggatcgggccgccgagcgcctggcgcgcgccgtg
cgtgagcaacatcccgtggaggtgcacggcgattacgatgtggacgggatcagcgccgca
gccttgttggtggagagtctgcgggccatgggcgcgcaagtcgattttcatatccccctg
cgtttgcgcgacggctatggtctttccgccgaggccctgcgggccgcccaggccaggggc
aagcacctggtggtttcggtcgactgcggcatcagcgccgtcgcggaggcgcggctggcg
gccgagctggggctcgatctcatcatcaccgaccatcaccagcccccccaggagttgccg
cgggctctggcactgatcaatccccatctgcccgacgacacttttcccgataagcacctc
gccggcgtcggggtggctttttttctggccctggcggtgcggcgcgaattgcgcgcccag
ggctggtttcacagccgacccgagcccgacctcaagcaggttctcgatctggttgccctg
gggaccattgccgacatcgtgcccctgaccggcgtcaatcggattttgacccgtgctggg
ttggatctcatggcccaggatcgccgccccggcctggctgcattacgccaggtcgccgga
gtgcgggagatcaattgtggagcggtgggctttcagttggcgccgcgtctcaatgccgcc
ggtcgcctggaggatgcggccgcggcggtcaggctgctgctgaccgaggacgctcaggag
gcacgcgctattgccgagcagcttgacgcgtgcaatcgacagcgccaggccatcgaggcg
gaaaccttcagccaggcgctggagcgccttgcaaagctggatcagccgcagcgcaattcc
attgtcctcgccgatgagcgctggcatcccggtgtcatcggcatcgtcgccagccggctg
gtggagcgctttcataggcctacggttctgattgccctggagcaggggcgcggcaaggga
tcggcgcggtcaatccgcgggtttcatctgtatcaggccctggagcgttgcagcacggag
ctgcaaggcttcggcggacatgaatacgcggccggattgactcttagcgcgcatcaggta
gagagttttgacgcgcggttcgaaaatgtggcgcacgagtggctcgatgaggaggctttg
ctgccgcaaatgctgcacgacggtgaagtggaactgaccgccttcgcccaggcagacgta
gccgaactggccgccctcgctcccttcggccctggcaatcccgagcccctgttccgcgtg
aacggggcggtctttgagcggccgcgctgcgtgggtcgcgatcatctgcaattccagttg
cgccaggacgacttgagtctgccttgtatcgccttcggcgcggcagcgcgttggcagggc
atcaaggggcgggtcgatgtgctctgtacgccgcagatcaatcgctggcaggggcgtgac
tccgtccagttgcgggtgaaggatttacgggaaaatggataa
DBGET
integrated database retrieval system
