Geoalkalibacter halelectricus: L9S41_16080
Help
Entry
L9S41_16080 CDS
T09882
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
ghc
Geoalkalibacter halelectricus
Brite
KEGG Orthology (KO) [BR:
ghc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ghc03400
]
L9S41_16080
DNA repair and recombination proteins [BR:
ghc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
L9S41_16080
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vsr
Motif
Other DBs
NCBI-ProteinID:
UWZ79183
UniProt:
A0ABY5ZJ78
LinkDB
All DBs
Position
complement(3503669..3504052)
Genome browser
AA seq
127 aa
AA seq
DB search
MSRISGRDTKPEIAVRRILHAMGYRFRLHVRQIPGNPDIVLPRHRKVVFVHGCFWHGHAG
CPRSKRPSTNVGFWNAKIDANMARDERAVRGLVGDGWRVLVIWECETRMQDQLIEKLSEF
MRDKENN
NT seq
384 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgaatttcaggacgggatacgaagcctgaaatagccgttcgcagaattcttcac
gctatgggataccgcttccgattgcacgtacggcagattccgggaaatcccgatatcgtc
ctgcctcggcatcgtaaggttgttttcgtacatggatgtttttggcacggccatgctgga
tgtccccgatcgaagcgtccctccacgaatgtcggcttctggaatgcaaagatcgatgcc
aatatggctcgcgacgagagggctgttcgtgggcttgtaggcgacggctggagggttctc
gttatttgggaatgtgagacgagaatgcaggaccaattgattgaaaaactatccgagttc
atgagggataaggaaaataattga
DBGET
integrated database retrieval system
