Gossypium hirsutum (upland cotton): 107885948
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Entry
107885948 CDS
T04793
Name
(RefSeq) U-box domain-containing protein 13-like isoform X1
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
107885948
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107885948
Enzymes [BR:
ghi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107885948
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
U-box type E3
107885948
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Arm
PUB10_N
ARM_PUB
U-box
ARM_ARMC5
Neurochondrin
HEAT_2
zf-RING_UBOX
MLKL_N
PUB2_N
zf-Nse
zf-C3HC4_4
HEAT_EZ
Arm_2
zf-C3HC4_2
zf-C3HC4
DUF8323
DUF6746
zf-RING_2
zf-rbx1
LD_N
MCAfunc
Motif
Other DBs
NCBI-GeneID:
107885948
NCBI-ProteinID:
XP_040963519
UniProt:
A0ABM3B8Y4
LinkDB
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Position
A03:complement(8385048..8389397)
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AA seq
658 aa
AA seq
DB search
MEEEKGALVQGLIDAVNQIASIGDYSCAVKKEYCNLARRLKLLTPMFEEIREIKEQIPEE
TVKALVSLKEALVSAKELLIFGSEGSKIYLVLEREQIMHKFHEVTARLEQALSRISHENL
DILEEVKEQVELVLAQFRRAKGRVDVPDVELYEDLLSLYNKSNDAAADPEVLRRLAEKLQ
LVGIAELMQESLALHEMVSASGGDPGAIFEKMSNLLKEIKDFVQTENPNLDAPAREKNLP
PSSSCAQTTTVANHKAPVIPDDFRCPISLELMKDPVIVSTGQTYERSCIEKWLEQGHRTC
PKTQQTLSNPALTPNYVLRSLIAQWCEANGIEPPKRPSSSQPSKTKFACSPAELTKIQIL
LCKLSSSNPEDQRMAAGEIRLLAKRNADNRVAIAEAGAIPLLVKILSTPDSRTQEHAVTA
LLNLSICEDNKGSIISSGAVPGIVQVLKKGSMEARENAAATVFSLSVVDENKVAIGASGA
IPPLVTLLSEGTQRGKKDAATALFNLCIYQGNKGKTVRAGVIPTLMRLLTEPGGGMVDEA
LAILAILASHPEAKSAIGAAKAMPVLVDFIGNGLPRNRENAAAVLVHLCAGDQQHLAEAE
ELGVMSHLVDLAQNGTDRGKRKAAQLLQRLSRFVEQQKRSQSQAEAQAEQSLSQSHAQ
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagagaaaggagcgctggtgcagggcttgatcgatgcggtgaaccaaatagct
tcgatcggtgactacagttgcgccgtgaagaaggagtattgcaacctcgctaggagactg
aagctgttgacgccaatgttcgaggagattagagaaatcaaagagcaaatccctgaagaa
acggttaaagctttggtatcgttgaaagaagctctggtttcggctaaggagttgcttata
ttcggaagtgaaggcagcaagatttacctggttctagagagggagcagattatgcataaa
tttcatgaagtgacagctcgattggagcaggctttgagtagaatttcccatgagaatctt
gacatcctagaagaagttaaggaacaggttgagcttgttctagctcagttcaggagagct
aaagggagggttgatgtacctgatgttgagctgtatgaggatctattgtcactctacaac
aagagcaatgatgcagcagcagatccagaggtactaaggagattggctgagaagttacag
ttggtgggaatagctgaacttatgcaagaatctctagctctacatgagatggtttctgcc
agtggtggagatcccggggcaatatttgagaagatgtcaaacttattaaaggaaatcaag
gattttgtacagacggaaaatcctaacttggatgctcctgcaagagaaaagaatcttcct
cctagtagcagctgtgcgcaaacaaccactgttgcaaatcacaaggccccagttatacca
gatgatttccgctgtccaatatcccttgagctgatgaaggatcccgtcattgtttcaaca
gggcagacttatgaacgatcttgcattgagaaatggctggagcaagggcatcgaacatgt
ccaaagacacaacagactcttagtaatcctgctcttactcccaattatgtattgcgaagt
ttaatagctcaatggtgtgaggcaaatggcattgaaccgcccaaaaggccgagtagttct
cagcccagtaaaaccaaatttgcctgctcgcctgctgaacttaccaagattcaaattctc
ctctgtaagctctcatccagcaatcctgaagaccaaagaatggctgcaggtgaaatccgt
cttcttgctaaacgcaatgcagataaccgtgtagccattgctgaagcgggggctatacct
ctccttgtaaaaatcctttcaacacctgactcacgcacccaagaacatgctgtgacagca
cttcttaacctttctatttgtgaagataacaaaggaagtatcatatcctctggtgcagtt
cctggtattgtccaggtgcttaagaaggggagcatggaagctagagaaaatgcagcagcc
accgtcttcagcctttcggtagtggatgaaaataaggtggcaattggcgcctcgggagca
atccctccactagtgacactgctaagtgaaggcacacaaaggggcaaaaaggatgcggca
acagcactcttcaacttgtgcatttaccaagggaacaaaggaaaaactgtgagagctgga
gttatacctacgttaatgcgtttgctgacagaacctggaggcggaatggtggatgaggca
ttggccatacttgcaattcttgctagccatcctgaagcaaagtccgccattggagcagca
aaggctatgccagttttggtagattttattggaaatggattgccaaggaacagagagaat
gcggctgctgttttggtgcacctttgtgccggagaccaacaacatctagcagaggctgag
gaactaggcgtgatgagtcatttggtggacttggcacaaaatggtacggataggggcaag
cggaaagctgctcaactgctccagcgcttaagcagatttgttgagcagcaaaagcggtca
cagtcccaagctgaggcccaagcagagcagtccctatctcagtctcatgctcagtag
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