Gossypium hirsutum (upland cotton): 107885972
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Entry
107885972 CDS
T04793
Name
(RefSeq) pumilio homolog 2
KO
K17943
pumilio RNA-binding family
Organism
ghi
Gossypium hirsutum (upland cotton)
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Gene cluster
GFIT
Motif
Pfam:
NABP
PUF
Motif
Other DBs
NCBI-GeneID:
107885972
NCBI-ProteinID:
XP_016665234
UniProt:
A0A1U8HPM5
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Position
A03:complement(9394813..9401641)
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AA seq
1060 aa
AA seq
DB search
MLSELGRRPMIGSGEGSFGDDLEKEIGLLLREQRSRQDADDLERELNLYRSGSAPPTVEG
SLSAAGGLFGGGAATAAAGNPAFSAFAQAKSGNSFIPEEELRSDPAYHSYYYSNVNLNPR
LPPPLLSKEDWKFAQRLKGGSSVVGGIGDRRKLNRADNGSNRSLFSMPPGFNSRKQENEV
EVEKVHSSGDWGGDGLIGLPGIGLGSKQKSLAEFFQDDLGHPAPIARIPSRPASRNAFDE
NFDNVGSSESELAHLQHELTSSDTLRSNASVQGLSAVHNIGSPSSYTYAAAVGAPLSRST
TPDPQLCARAPSPGLTQTVGGRVGNPDKRSISSPSPLGGVAPGVNDSANLVAALSGMHLT
SNGVIEEGNQLPSQIEQDAENRQNYLFGLNDGQNHIKQKLYLKKSESVHMPSTKSNGGRS
DFKNPSLLSDRQAEFQKSAVSSNTSYMKGSPTSTLNGASSFPAQFQHGDGANSSFSNYGL
SGNSLNPALASMMASQFGTSNMPPLFGNVTASSAVPILGMDSRVLGGGLGSGQNISNAAS
ELHNLGRVGSQIAGNALQAPFVDPMYLQYLRTSDYTAAQLAALSDPSMDRNFLGNSYMNL
LELQKAYLGALLSPQKSQYGGVPLGAKSGSSNLHGFYGSPTFGTGMSYPGSPLASPLIPN
PPVGPGSPIRHTDLNMHFPSGMRNLAGAVMGPWHLDAGYNMDESFASSLLEEFKSNKTKC
FELSDISGHIVEFSADQYGSRFIQQKLETATTEEKNMVYEETMPQALALMTDVFGNYVIQ
KFFEHGLPAQRRELAGKLFGHVLALSLQMYGCRVIQKAIEVVDLDQKIKMVQELDGTVMR
CVRDQNGNHVIQKCIECVPEENIQFIVTTFFDQVVTLSTHPYGCRVIQRILEHCKDPKTQ
SKVMDEILGSVSMLAQDQYGNYVVQHVLEHGKPDERSVIIKELAGKIVQMSQQKFASNVV
EKCLTFGGPDERQLLVNEMLGSTDENEPLQAMMKDQFANYVVQKVLETCDDQQRELILSR
IKVHLNALKKYTYGKHIVARVEKLVAAGERRIAAQSPNPA
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atgttatctgaattgggtaggagaccaatgataggaagtggtgagggatcatttggggat
gatttggagaaggaaatagggctactgctccgtgaacagcgcagtaggcaagatgccgat
gatctcgaacgcgagctaaacttgtatagaagtggctctgcccctcctaccgtggagggt
tcactgagtgcggctggtgggttgtttgggggtggagctgctactgcagctgccggtaac
cctgccttttctgcttttgctcaagctaaaagtgggaatagttttatacctgaagaagag
cttaggtctgatccggcttatcattcatactattactcgaatgtgaatctcaatccaagg
cttccacctcctttgctttccaaggaggattggaagtttgcgcagaggttgaagggaggg
agctcagtggtaggtgggattggagataggaggaaattgaatagagctgataatggtagc
aataggtcgttgttttcgatgccaccagggtttaattctaggaaacaagagaacgaagta
gaggtagagaaagtgcatagctcaggggattggggcggtgatggactgattggtttgcct
ggtataggacttgggagcaaacagaaaagtctcgctgaattttttcaggatgatttgggg
caccctgcaccaatcgcaagaataccatctcgtcctgctagtcgtaatgcttttgatgag
aactttgacaatgtaggctcttctgaatcagagctggctcatttgcaacatgaactgacc
tcctcagatactctgaggtcaaatgcaagtgttcaaggattatctgcagtccataatatt
ggatcaccttcttcatacacttatgctgctgctgtaggtgctcccttgtctaggagtaca
acgccagatcctcaactttgtgctagggctcctagtcctggcctgacacaaacagtagga
ggcagagttggtaaccctgataaaagaagcataagtagcccaagtccacttggcggtgtc
gcacctggtgtcaatgattctgcaaatctggtagcagctttatcaggcatgcatctgact
tcaaatggtgtgatagaggagggtaatcagttaccttcgcagattgagcaagatgctgaa
aatcgccagaattatttgtttggtctgaatgatggtcagaatcatatcaaacaaaagctt
tacttgaagaaatctgaatctgtgcatatgccttcaactaagagtaatgggggcagatca
gacttcaaaaacccatccttgctttctgataggcaagctgagttccagaaatctgctgtc
tcctcaaacacttcttacatgaaaggatcacctacttccactctcaatggtgcaagcagt
tttcctgctcagtttcagcatggtgatggtgcaaattcatcattttcaaactatgggtta
agtggtaactctttaaatcctgcattggcctctatgatggctagtcaatttggaactagt
aatatgccaccattatttggaaatgttactgcttcatcagctgtaccaatccttggaatg
gactcaagagtgctagggggaggtttgggctctggacagaacatttcaaatgctgcatct
gagttgcataatcttggtagagttggaagccaaatagccgggaatgctctgcaggcacct
tttgttgatcctatgtatctacagtatctgaggacctctgattatactgctgcgcagctt
gcagctcttagtgatccctccatggataggaacttccttggtaattcatacatgaacttg
cttgagctgcaaaaggcttatcttggagctctgttatcacctcaaaagtctcagtatggt
ggtgttccgttgggtgctaaatctggtagttctaatcttcatggtttttatggtagtcct
acctttggaactggcatgtcatatccgggaagccccttagcaagtcctcttattccgaac
cctccagttggacctggtagtcctatcaggcatacagacctaaacatgcattttccttct
gggatgaggaatcttgctggggcagtcatgggaccctggcatttggatgcaggatataac
atggatgaaagctttgcctcctctctacttgaagagtttaagagcaataaaacgaagtgt
tttgagctttcagatatctctggtcatattgttgagttcagcgcggatcagtatggcagc
cgctttattcagcaaaaacttgaaacagctacaactgaagagaagaatatggtttatgag
gaaaccatgcctcaagctcttgctttgatgacagatgtgtttggtaactatgtcattcaa
aagtttttcgagcatggacttccagctcagagaagagaacttgctggcaagctttttggt
catgttttagcacttagtcttcaaatgtatggttgtcgagtgatccagaaggcaatagaa
gttgttgatctggatcagaagattaaaatggtccaagagcttgatggtactgttatgcgt
tgcgtacgtgaccagaatggcaaccatgtcatccagaagtgcattgaatgcgttcctgag
gaaaacattcaatttatagtcacaactttttttgatcaagttgtgacactttctactcat
ccatatgggtgccgagtgatacagaggatactggagcactgcaaggacccaaaaacgcaa
agtaaggttatggatgagattttaggatctgtcagcatgttggctcaagaccagtatggc
aattatgtcgttcagcatgtgctggagcatggaaagcctgacgagcgttcagttataatt
aaggaattagctggaaaaattgtccagatgagtcagcagaagtttgcctctaacgttgtt
gagaagtgtttaacttttggtggcccagatgaacgtcagttgttggtgaatgaaatgctt
ggttctaccgatgagaatgagcctcttcaggcaatgatgaaagatcagtttgcaaattac
gttgtacagaaagtactagagacttgtgatgaccagcaacgtgagctgatcctttctcga
attaaggtccacttaaatgcattgaagaagtacacttacggaaagcacattgttgcacgt
gtagagaagcttgttgctgctggggagagaaggattgctgctcagtctccgaatccggct
tag
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