Gossypium hirsutum (upland cotton): 107886089
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Entry
107886089 CDS
T04793
Name
(RefSeq) axial regulator YABBY 1 isoform X1
KO
K25796
plant-specific transcription factor YABBY family protein
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ghi03000
]
107886089
Transcription factors [BR:
ghi03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Yabby
107886089
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YABBY
YABBY_N
HMG_box_2
Ccdc124
HMG_box
Zn_ribbon_12
Motif
Other DBs
NCBI-GeneID:
107886089
NCBI-ProteinID:
XP_016665403
UniProt:
A0A1U8HN46
LinkDB
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Position
D12:57654800..57657773
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AA seq
211 aa
AA seq
DB search
MSSSSTLSLDHLPPSEQLCYVHCNICDTVLAVSVPCTSLFKTVTVRCGHCTNLLPVNMRG
LLMPSANQFHLPHNFFTPSHNLLEEISNPSPNILLNQGNTSDITLPTRGVADELPRPPVI
NRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDITHREAFSAAAKNWAHFPHIHFGLMPDQP
AKRTNVRQQEGEDVLMKDGFFASANVGVTPY
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcctcttctaccttgtctttggaccacctccctccctccgagcagctctgttac
gttcattgcaacatctgcgacactgtccttgcggttagtgttccttgcacaagtttattc
aagactgtgacggttcgatgtggccactgcaccaatcttttgccagtgaacatgcgtggg
ttgcttatgccctctgctaatcagtttcatttgcctcacaattttttcactccttcccat
aatcttctggaagagatctcaaatccttctcccaacattttgctgaatcaaggcaacacc
agtgacatcaccttacccactcgtggagtagctgatgagcttccaaggcctcctgttatc
aacagacctccggagaaacgacagagagtcccctcagcgtacaaccgattcatcaaggac
gagatccaacgcatcaaggcaggaaaccctgatataactcacagagaagccttcagtgca
gctgcaaagaattgggctcacttcccacatattcacttcggcctaatgcctgatcagcct
gccaagaggactaacgtgcgccagcaagaaggcgaggacgttctcatgaaagatgggttt
tttgcttcagctaacgtcggcgtcactccgtactaa
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integrated database retrieval system
