Gossypium hirsutum (upland cotton): 107886106
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Entry
107886106 CDS
T04793
Name
(RefSeq) two-component response regulator-like APRR1
KO
K12127
pseudo-response regulator 1
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
107886106
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GFIT
Motif
Pfam:
Response_reg
CCT
Jas_motif
VpsR
Motif
Other DBs
NCBI-GeneID:
107886106
NCBI-ProteinID:
XP_016665432
UniProt:
A0A1U8HH35
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Position
A03:18860748..18866204
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AA seq
552 aa
AA seq
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MESKELNLNKELKAGGAGNGFIDRSKVRILLCDNDTKSCEEVFSLLLKCSYQVTTVRSAR
QVIDALNAEGPDIDIILTEVDLPMTKGMKLLKYIMRNNELRRIPVIMMSAQDEVSIVVKC
LRLGAADYLVKPLRTNELLNLWTHMWRRRRELGLSEKNILNCDFDLVASDPSDANTNSTT
LFSDDTDERSRKSSNPEMGISTHQEDESAAATVEPPQSDSPECRPDVPGISDRRTGQFSS
VPKKSELKIGESSAFFTYVKSSAVKTSSTQVATPNHESAAENKIGEEHLPQPGEQVVSDT
RVHENGETWENNSQGDEFRSSSSVPDSLSLERSSTPASMEFSQQRDFKEDKFSPALVPPS
NETQHDVSGLPTQSPYLHYMPGVLNQVMMPSSTQLFQNNLHDIHNHTSSPLVPQYNHLQQ
CLPHPHVSGMASFPYYPVNMCMQPGQMPTGHSWPSFGNSSSNEVQPSKVDRREAALIKFR
QKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKNGATVDLNGQPASADYDEDEEEEQAS
RDSSPEDDTSGC
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggagagcaaagaactgaatttgaataaagagcttaaagcaggaggagcaggaaatggg
tttatagataggagcaaagtgaggattttgctatgtgataatgataccaagagctgtgag
gaagttttttcacttcttttgaaatgttcttatcaggtgactacagtaaggtctgccaga
caggtcattgatgcacttaatgctgagggacctgacattgatataatacttactgaagtc
gacctcccaatgacaaaaggaatgaagttgttaaagtatattatgcggaataatgaactg
cggcgcattcctgttattatgatgtcggcccaggatgaggtctctattgttgttaagtgc
ctgaggcttggtgctgctgactatcttgtcaagcctttacgaaccaatgaattgttgaac
ttgtggacacacatgtggagaaggcgacgtgagcttggtctttcggaaaagaacatctta
aactgtgactttgatctagtggcatcagatcctagtgatgctaatacaaacagtactact
ttgttctcggatgatacagatgagaggtcccggaagagctctaatccagagatgggaatt
tcaactcatcaagaagatgaatctgctgctgctactgtcgagcctcctcagtctgattca
ccagaatgccgtcctgatgttcctggaataagtgaccgtcgaacagggcagttttcatct
gttccaaagaagagtgagctaaagattggcgagtcatctgccttctttacttatgtgaag
tcaagtgcagtaaaaaccagcagtactcaagttgcaacccctaatcatgaaagtgctgct
gaaaataagatcggtgaagagcatctcccgcaacctggtgaacaagtggttagtgatacc
agagtacatgagaatggtgaaacatgggaaaacaactcacaaggtgatgagtttcgtagc
agcagtagcgttccggattccctttccttggagaggtcttcgacccctgcatcaatggag
ttctcacaacaaagggattttaaggaagacaagttttctccggcacttgtgcctcctagt
aatgaaactcaacatgatgtatccggtttacctacacaaagtccctatctacactacatg
ccaggagttctaaatcaagttatgatgccatcatcgacccagttgtttcagaacaacctc
catgacatccataatcatactagttctcctttggtccctcaatataatcatcttcaacaa
tgtcttccccatcctcatgtaagtgggatggcatcgtttccatactaccctgttaatatg
tgcatgcaaccgggtcagatgccaaccggtcactcatggccatcatttggaaattcatct
tccaatgaagtgcaaccaagtaaggttgacagaagagaggcagcattaatcaaatttcgg
cagaaaaggaaagagcgctgtttcgataagaagatcagatatgttaataggaaaaggcta
gctgaaaggaggcctcgtgtgaggggacaatttgtgaggaagaatggtgcaacagttgat
ctcaatggccaacctgcttctgctgattacgatgaggatgaagaagaggagcaggcatca
agggattcatcacctgaagatgatacttcaggatgttga
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