Gossypium hirsutum (upland cotton): 107886126
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Entry
107886126 CDS
T04793
Name
(RefSeq) tRNase Z TRZ1
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ghi03016
]
107886126
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
107886126
Transfer RNA biogenesis [BR:
ghi03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
107886126
Prokaryotic type
107886126
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Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
PDEase_II
Motif
Other DBs
NCBI-GeneID:
107886126
NCBI-ProteinID:
XP_016665457
UniProt:
A0A1U8HH66
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Position
A03:17472884..17476245
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AA seq
300 aa
AA seq
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MDKRGPKSKNPEPGNQGNYEKKSKKGLEIEGYRVEGLSIGGHETCIIFPTLNLAFDIGRC
PQRALSQDFLFISHGHMDHIGGLPMYVATRGLYGMKPPTIVVPTCIKEDVEKLFEVHRKM
DQSELKHNLIGLDVGEEFLLRRDLKVRAFRTYHVIPSQGYVVYSVKQKLKDEYLGLSGNE
IKNLKSSGVEITYTTTTPEVAFTGDTMSDFIVDEANLDVLRAKILVVESTFVDNSVSVEH
ARDYGHVHLSEMINYADKFKNRAILLIHFSARYALETIQEAIAALPSPLAGRVFALTEGF
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaggggtccaaaatcaaagaacccagaaccaggaaaccaaggaaactatgag
aaaaagagcaaaaagggattggaaattgaagggtaccgagtggaagggttgtcaatagga
gggcatgaaacttgcattatttttcccactctaaacttagcatttgatatcggtcgatgc
ccacaacgtgccctttctcaagatttcctttttatttctcatggacatatggatcatatt
ggcggcctgccaatgtatgtcgcaacacggggtttatatggcatgaagcccccaacaatt
gttgtacctacttgtataaaagaagatgtagagaaactctttgaggtgcatagaaagatg
gatcaatcagagcttaagcataatttaatcggcttggatgtgggagaagagtttttattg
agaagggacctaaaagtaagagcttttagaacttaccatgtcatacccagccagggttat
gtagtttattctgtaaaacaaaaacttaaagacgagtacttggggctttctggaaatgag
atcaagaacttgaagtcatcaggtgtggagattacttacactactacgacaccagaagtt
gcctttactggagatacaatgtctgacttcatagttgatgaagctaatttagatgttttg
agggcaaagattcttgttgtggagagcacatttgtagataactcagtatcggttgagcac
gccagagattatggacacgttcatctgtctgagatgattaattacgcggacaagttcaaa
aacagagcaattcttctgattcacttctcagctcggtatgcattagagactatccaggaa
gcaattgcggcgctgccttcacctctggctggccgagtttttgcacttacagaaggtttc
taa
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