Gossypium hirsutum (upland cotton): 107886173
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Entry
107886173 CDS
T04793
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 15 isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ghi01002
]
107886173
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107886173
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
107886173
Peptidases and inhibitors [BR:
ghi01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
107886173
Ubiquitin system [BR:
ghi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
107886173
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
Motif
Other DBs
NCBI-GeneID:
107886173
NCBI-ProteinID:
XP_016665516
UniProt:
A0A1U8HHE3
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All DBs
Position
D11:complement(66478165..66485841)
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AA seq
965 aa
AA seq
DB search
MLKPREADIPALFLVLVVLPLVAYFLLGKWSEASKKQEQISLLAQLAAEEALRAETMAAA
SVIPLVPSSKNGLHACAWCFGPATTRCSRCKAVKYCSGRCQIIHWRQVHKQECLQLENTS
SSSSPSVASFGESALLGDNMNSQFFGDCSTVDSSQDRLADMRSTEKRIPCKSNKDMLQRE
DATIFDSCEETSRTRASSSASNNISLKEAFIRHKLRTSGFVESEEGMLRPQNANGSTMHT
QRQNASMVMHENHKHQSQCGNKSEPKSNYKFSCPPYSAKDGLSAREAENALFQSSENLVN
RENGYSGESVELDCSGMTAVKECTKARSSVHSLGPKISKSPKLAAKVPVEQLCTEMGRKG
QIPNELKVSGMAGAIRAQGTNGAASGGIMEMMGLKKSTKPARSSFSALCGERRKKIKTLF
PYEEFVKFFQCEAFDLSPRGLLNIGNSCYANAVLQCLTCTKPLSIYLLRQSHSRACYGKD
WCLMCELEQHVMLLRESGGPLSSTRILSHIRSINCQMGDGSQEDAHEFLRLLVASMQSIC
LERLGGEHKVDPRLQETTFIQHTFGGRLRSKVKCLRCFHESERYENIMDLTLEIYGWVES
LEDALTQFTTPEDLDGENMYRCGRCAGYVRARKQLCIDEAPNILTIVLKRFQEGKYGKIN
KCITFPDMLDMVPFMTGTGDIPPLYMLYAVVVHLDTLNASFSGHYVSYVKDLRGNWFRID
DTEVRPVSMSQVMSEGAYILFYMRSCPRLQREFTEKSIRKQVPTRHLVSKTERPSRAAQS
KSGSCSVGPKHVSDFSPRTATGCYNHNGNDILRQSTNGNIPDPINMEFSDATSSDWSLFT
SSDEASFTTESARDSFSTVDYADASNGDTFSIFNNLSTPESSSYNTVSCRMFSTSRPYTR
FALEETGYVYDSYSSMQPDFGYHENLEQVSDSLSEFSLASDYGLFVKYGNNPKNSLDRTA
NYEPY
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgctcaagccaagggaagctgatatacctgcgttgtttctggtcttggtggtgcttcct
cttgttgcttacttcttactcgggaaatggagtgaggcttcaaagaaacaagaacagata
agtttacttgctcagcttgctgccgaagaagctcttagagctgaaacaatggctgctgcc
agtgttattccgcttgttccttcttcaaagaatggattacatgcatgtgcctggtgcttt
ggtcctgcgacaactcgctgctcgagatgcaaggctgtcaaatattgttctgggaggtgc
cagattattcattggaggcaagtacataagcaagaatgcctgcagttagagaatacaagc
tcaagttcatctcctagtgttgcctcgtttggagaatctgcactactcggtgacaacatg
aattcacagttctttggggattgttctacggttgattcctctcaagaccgtctggctgat
atgagaagtacagagaagagaattccttgtaaatccaacaaagacatgttgcaaagagag
gatgcaactatatttgattcttgtgaggaaacctcaaggactagagctagtagttcagca
tctaataatatttctttgaaagaggcttttataaggcataagttgagaactagtggattt
gtcgaatcggaagagggtatgttaaggccacaaaatgccaatggctcaactatgcatact
cagagacaaaatgcaagtatggtcatgcatgagaatcataaacatcaaagccaatgcgga
aataagtctgaaccaaaaagcaactataaattttcctgcccaccatattctgcaaaagat
ggtctgagtgcacgtgaagctgaaaatgccttattccagagttcagagaatttagtcaat
cgggaaaatggttatagtggcgaatcagtagaattagactgttctgggatgacagccgtg
aaggaatgcacaaaagctagaagttcggtgcattccttaggacccaaaatctctaaatca
cctaaattagcagcgaaagttcccgtagaacaattatgtacggaaatggggaggaaggga
caaattccaaatgaattaaaagtttcgggaatggcgggtgccattcgggcacaaggaacc
aatggggcagctagcggcggaattatggagatgatgggtttaaagaagtcaacaaagcct
gccaggagcagtttttctgcgctttgtggcgagagacggaagaaaataaagacactgttt
ccttatgaagaatttgtaaaatttttccagtgtgaagccttcgacttatcaccaagggga
cttctaaatatagggaacagttgttatgccaatgctgttctgcagtgtttaacctgcaca
aagcctctcagcatctatttgctgcgtcaatcacattcaagagcctgttatgggaaagat
tggtgtcttatgtgtgagcttgaacaacatgtgatgttgttaagagagagtgggggcccc
ttgtcttctactaggatcctttcgcacatccgaagtattaattgtcagatgggtgatgga
agccaggaagatgcacatgagttcttgagactcctggttgcttcaatgcaatccatatgc
ttggagagattaggtggggaacacaaggttgacccgaggttgcaagagacgacatttata
caacatacttttggtgggcgtcttcgatcaaaggtaaaatgtctacgatgttttcatgag
tcggaaagatatgaaaacattatggatcttactttagagatatatggttgggttgaatca
ttggaagatgcactaactcagtttacgacacccgaagatttggatggcgaaaacatgtac
cggtgtggaaggtgtgccggttatgttcgggctcgtaagcagttgtgcatagatgaggct
cctaatatactgacaattgtcttaaagcggtttcaggagggaaaatatggaaaaataaac
aagtgtatcactttccccgacatgctcgacatggttccttttatgactggaacaggtgac
atccccccactttacatgctttatgctgttgtggtgcatttggataccctgaatgcatct
ttttcaggacattatgtgtcatacgtaaaagatttgcgaggcaactggttcaggatagat
gatacagaggtacgtccagtctcaatgagccaggtgatgtctgagggcgcatacatccta
ttttacatgaggtcatgtcctcgtcttcaaagagaattcactgaaaagagcatacggaag
caagttcctactaggcacctcgtatcaaaaaccgagaggccttcacgagcagcacaaagt
aaatctggcagctgctctgttggccccaagcatgtatcagatttcagtcccagaactgca
accggttgttacaaccacaatggtaatgacattcttaggcagagcacaaatggtaacatt
cctgatcctattaacatggagttctccgatgctacatcaagtgattggtcccttttcaca
agctcagacgaggcatctttcacaacggagagtgctagagactcattcagtaccgtagat
tatgctgatgcaagcaatggagatacgttctcaatcttcaataacttatcaacaccggaa
tcctcctcttacaacacggtttcttgtagaatgttttctactagtagaccctatactcgg
tttgcgttagaggagacaggttatgtttacgattcatactcatctatgcaacccgacttt
gggtatcacgagaacctggaacaggttagtgattcgttgtccgaattttctttagctagt
gactatggcttgtttgtaaaatacgggaacaacccgaaaaatagtcttgatagaactgct
aattatgaaccctactag
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