Gossypium hirsutum (upland cotton): 107886209
Help
Entry
107886209 CDS
T04793
Name
(RefSeq) chaperone protein ClpC1, chloroplastic
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
ghi03110
]
107886209
Chaperones and folding catalysts [BR:
ghi03110
]
Heat shock proteins
HSP100
107886209
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
Clp_N
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
AAA_16
Sigma54_activat
UVR
AAA_22
nSTAND3
TniB
NBD_SMAX1
AAA_14
NACHT
AAA_18
AAA_28
Zeta_toxin
AAA_25
IstB_IS21
DNA_pol3_delta2
Torsin
FapA
AAA_23
Motif
Other DBs
NCBI-GeneID:
107886209
NCBI-ProteinID:
XP_016665569
UniProt:
A0A1U8HQI9
LinkDB
All DBs
Position
A03:13910642..13916593
Genome browser
AA seq
922 aa
AA seq
DB search
MAKILAQSAIVPTLLSSRSHGASKESGKPKRSAKMMCSLQTPGLRIRSFSGLRGSNSLDN
IVRYGQDFHSKVGISISSQRGRGSRCVPKAMFERFTEKAIKVIMLAQEEARRLGHNFVGT
EQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLEL
SLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGEGNEVSV
VTGGSGGNTKMPTLEEYGTNLTKLAEEGKLDPVVGRQDQIERVVQILGRRTKNNPCLIGE
PGVGKTAIAEGLAQRIASGDVPDTIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIK
QSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKDPA
LERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALISAAQLSYQYISDRFLPD
KAIDLIDEAGSRVRLRHAQLPEEAKELEKELRQITKSKNEAVRSQDFEKAGELRDREIEL
RAQITAIQEKDKEMNKAEAEAGDGGPVVTEVDIQHIVSSWTGIPVEKVSTDESDRLLKME
ETLHKRVIGQDEAVIAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYF
GSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAH
PDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDS
SYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKDKEIE
LQVTERFRERVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDG
NVTVLNGSSGTPESLGDPISVV
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atggctaagattctggctcagtctgctattgttcctactctactttctagtcgtagccat
ggtgcgtctaaagaatctggaaaaccaaagaggtctgccaaaatgatgtgcagtttacaa
actcctggattgaggataaggagtttttctgggttgcgaggctcaaattctttagataat
attgtcagatatggccaagatttccattctaaggttggaatttcaatatcttctcaacgg
ggaagaggtagcagatgcgtacctaaggccatgtttgagcgcttcactgagaaagcgatt
aaagtaattatgcttgcacaagaggaagccagacggcttggccataattttgttggtact
gagcaaattttattgggccttattggtgaaggtactggcattgctgcaaaagttcttaaa
tccatgggaatcaatcttaaagatgcacgtgtagaagtggagaagataattggaagggga
agtggatttgtcgctgtggagattccttttactcctcgcgcaaaacgtgttctggaactc
tcgttggaagaagctcgccagcttggccataattatattggatcagagcatcttcttctt
gggttgcttcgtgaaggtgaaggtgtagcagcccgtgttcttgagaatttaggtgctgac
ccaagtaatatccgcacccaggttatccgtatggttggtgagggcaatgaagttagtgtt
gttactggaggatcaggtggaaacacgaagatgccaacacttgaggaatatgggaccaat
ctgactaagctagctgaggagggtaaattggatcctgttgttgggaggcaggatcaaata
gaacgtgttgtccaaatattgggtagacgaaccaaaaacaatccgtgtcttattggagaa
cctggtgttggtaaaactgcaattgcagaaggtcttgctcaacgtattgccagtggtgat
gttcctgatacaattgagggaaagaaggttattacacttgatatgggtctcctggttgct
ggaactaaatatcgtggagaatttgaggaaagattgaagaagctaatggaggaaatcaag
caaagtgatgaaattatattgtttattgatgaggtgcacaccttaattggagcaggagct
gcagaaggtgctattgatgctgccaatatcttgaagccagctcttgcaagaggtgaattg
cagtgtattggagcaacaacactggacgaatacagaaagcatattgagaaagacccagca
ttggaaagaagattccaaccggtcaaagtgcctgaaccatctgttgatgaaactatacag
attttgaaaggtttgcgagaacgttatgagatacaccataagcttcggtacacagatgag
gccttaatttctgctgcacagctgtcataccagtacatcagtgaccgttttctacctgac
aaagcaattgacttgattgatgaagccggttctcgtgttcgccttcgtcatgcacagctc
cctgaggaagctaaagagcttgaaaaagagctgaggcagatcacaaagtcaaagaatgaa
gcagtccgcagccaggactttgagaaggccggggaattacgtgatcgagaaattgaactt
agggctcagatcactgcaattcaggagaaagacaaggagatgaacaaggctgaggctgag
gcaggagatggaggtcctgttgtgacagaagtggacatccagcatatagtctcttcatgg
actggtattcctgttgagaaagtatcaactgatgaatctgatcgtctccttaagatggaa
gagacacttcataagcgagtcattggtcaggatgaagctgttatagccattagccgcgct
atccgacgtgcccgtgtaggtctcaagaaccccaaccggccaattgctagcttcatcttt
tctggaccaactggtgtaggaaagtcagaactagcaaaggctctagctgcttactatttc
ggctctgaagaagctatgatccgacttgatatgagtgagttcatggaaaggcacacagtg
tccaagctcattggttcacctcctgggtatgttggttacactgagggtggtcagctaact
gaggctgttagaagacgtccgtacactgtagtactttttgatgaaattgagaaggcccat
cctgacgtcttcaacatgatgcttcagatactcgaggatggaaggttgacagacagtaaa
ggacgaactgtggatttcaagaatacccttctgataatgacatctaatgttggaagcagt
gtaattgagaagggtggccgacggataggttttgatcttgattatgatgagaaagacagc
agttacaatagaataaagagcttggtgacggaagagctgaaacaatatttccggcctgag
ttcttgaatagattggacgaaatgattgttttcaggcagctcaccaagttggaggtgaag
gagatagcagatataatgcttaaggaggtgtttgacaggcttaaagacaaagagatagag
cttcaagtgactgaaagatttagggaaagggtggtggaagaaggatacaacccgagctat
ggtgcaaggcctttgagaagagccattatgagacttctcgaggacagcatggccgagaaa
atgcttgccagggaaatcaaggagggtgattcagtaatcgttgatgttgactccgatgga
aatgttacggttctcaatggtagcagcggtacgcctgagtcattgggcgatccaatttca
gtcgtttaa
DBGET
integrated database retrieval system
