Gossypium hirsutum (upland cotton): 107886229
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Entry
107886229 CDS
T04793
Name
(RefSeq) RNA pseudouridine synthase 7
KO
K15454
tRNA pseudouridine32 synthase [EC:
5.4.99.28
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ghi03016
]
107886229
Enzymes [BR:
ghi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
107886229
Transfer RNA biogenesis [BR:
ghi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
107886229
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-GeneID:
107886229
NCBI-ProteinID:
XP_040964538
UniProt:
A0ABM3BBV6
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Position
A03:complement(12701860..12756353)
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AA seq
393 aa
AA seq
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MKRDRDEVEEEGNEERNKRKMEIVWQTPAHPAQKQDYIFHNGKRHVRPYYFEFVSHVNKR
WEGKTIVDLFAQEFRGRSRDYYVSAVKCGRIQVDGENIPVSYIVKRCQKISHFLHRHEPP
VMAWDVEVLQNEPDVLTICKPASVPVHPCGQYRKNTVLGILQAEYGLAPLYPIHRLDRLV
SGLLIVAKNPAKADIFRQHIEAGLVQKQYVAKVVGVFPDAEQVVDANIDYNAREGRSTAE
VGISNGDTTLKGKAACTKFTRISTNGIYSIVLCEPVTGRTHQIRVHLQCTGHPIANDMLY
LSDDVVSRSTLGTTADRAASLSGGSPETSCESHKEEYKYCSEDFSIDPMCTHCPNLAPNG
YDGHEEGLWLHCVRYTGPEWVYECPYPDWASLT
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagagatagagacgaagtagaagaagaaggaaacgaagagagaaacaaaaggaaa
atggagattgtttggcaaactcctgctcatcctgctcagaaacaagattatatttttcac
aacgggaagcgccatgtacgaccttactactttgagttcgtctctcatgttaataaacgt
tgggaaggtaaaacaatagtggatttgttcgctcaagagttcagaggtcgatctagagat
tactatgttagtgctgtcaaatgtggacggatacaagtggatggagagaatatacctgtt
tcatacatagttaaacgatgccagaagattagccacttcttacataggcatgaaccacca
gtgatggcttgggatgttgaagttcttcaaaatgaacctgatgtactgacaatttgcaaa
cctgcatcagttcctgtacatccatgtggtcaatatcgtaaaaacacagttttgggtatt
ctccaagcagagtatggattggctcctttgtatcccattcatcgactagatcgtctagtc
tcaggactgcttatcgtggccaaaaatccagctaaagctgacattttcaggcagcatatc
gaagctggactagtgcagaaacagtatgttgcaaaggttgttggagtgtttccggatgct
gagcaagttgttgatgccaacatagattacaatgctagagagggaaggagcactgcagag
gttggcatctctaatggtgatactaccttgaagggaaaggctgcttgtacaaagtttact
aggattagcaccaatgggatttatagcattgtcttgtgtgaaccagttaccggccgaact
catcaaattcgtgtgcatttgcagtgtacaggtcatccaatagccaatgatatgctttat
ctttcagacgatgttgttagtcgctctactttaggaacaactgctgatagagctgcatct
ctttctggaggttctcccgaaaccagttgtgagagtcataaggaagaatacaagtactgt
agtgaagatttcagcatcgatcctatgtgtacgcactgtcctaatttagctccaaacggg
tatgatgggcatgaagaaggattatggctacactgtgtgcgttacactggaccggaatgg
gtttacgaatgcccatatcctgactgggcatcactcacttaa
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