Gossypium hirsutum (upland cotton): 107886402
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Entry
107886402 CDS
T04793
Name
(RefSeq) novel plant SNARE 11
KO
K08494
novel plant SNARE
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107886402
Membrane trafficking [BR:
ghi04131
]
SNARE
SNAP-25[N] (Qb)
NPSN
107886402
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec20
V-SNARE_C
Cauli_AT
MCPsignal
Helo_like_N
Occludin_ELL
DUF5089
ING
DUF948
FapA
Prominin
DUF1759
Phage_Gp23
JHD
MutS_III
Ndc1_Nup
Laminin_II
DUF6988
BORCS6
Vps53_N
Neur_chan_memb
CAP_N
Motif
Other DBs
NCBI-GeneID:
107886402
NCBI-ProteinID:
XP_016665840
UniProt:
A0A1U8HIF6
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All DBs
Position
D08:complement(57124806..57129009)
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AA seq
262 aa
AA seq
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MDPLAALSEELAEIDGQVADIFRALSNGFQKLEKIKDVNRQSRQLEELTDKMRECKRLIK
EFDREVKETERRTDANTHKMLNEKKQSMVKELNSYVALKKQHQSNLENNKRVDIFDGPSE
GFGEENVLLASSMTNQQLIDRGNHMMNETDQAIDRAKKVVQDTVDVGTETAAALKAQTEQ
MSRIVNELDSIHFSIKKASKLVKEIGRQVATDKCIMALLFLIVIGVIAIIIVKLVNPNNK
DIRDIPGLAPPAMNRRLLWTPN
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atggatcctttagctgcgctcagcgaagagctagcggagatcgacggacaagtcgccgac
atttttcgagctttatcaaatggattccagaaactggagaagattaaggacgttaatagg
cagagtaggcaattggaagagcttactgacaagatgcgagagtgtaagaggctcatcaaa
gagtttgatagggaagtgaaggaaacagagcgtagaactgatgcaaacacccacaaaatg
ctaaacgaaaagaagcagtcaatggtcaaggagttgaattcatatgttgcccttaagaag
caacatcaaagcaatcttgagaacaacaaacgagttgatatctttgatgggcctagtgaa
ggctttggggaagaaaatgtcttgctagcttcatctatgacaaatcaacagctaatagat
agaggaaaccatatgatgaatgagactgatcaagccattgacagggctaagaaggtcgtt
caagatactgttgatgttggaacagaaactgctgcagctctcaaggctcagactgaacaa
atgagcaggatagttaatgagctggattctatccatttctcaatcaagaaagcatctaaa
ctggtcaaagaaattggtaggcaggttgctactgataagtgcattatggccttgttgttt
cttattgtcattggtgtcatagccatcataatcgtgaagctggtgaatccaaacaacaag
gacattcgagatattccaggtttagcaccacctgcaatgaacaggcggctactttggact
cctaattga
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