Gossypium hirsutum (upland cotton): 107886482
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Entry
107886482 CDS
T04793
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00040
Pentose and glucuronate interconversions
ghi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
107886482
Enzymes [BR:
ghi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
107886482
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
107886482
NCBI-ProteinID:
XP_016665943
UniProt:
A0A1U8HPP3
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Position
A03:94390476..94392933
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AA seq
446 aa
AA seq
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MFYLSPALSLIIKSPPLISVSQNFSPFVHSHTLLSNKKKAIMAIPLSFLLLFPLLAPTFV
FSSPVQDPEQVVQQVNESIRNATMARRSLGFLSCGTGNPIDDCWRCDHHWEKNRQKLADC
AIGFGKHAIGGRDGKIYVVTDPSDHDPVNPKPGTLRYAVIQDEPLWIIFARDMTIKLKEE
LLMNSFKTIDGRGVSVHISGGPCITVQYVTNIIIHGINIHDCKRGGNAYVRDSPTHYGWR
TISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISNNYLTHHNKVMLLGHSD
TYKQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSADPTINSQG
NRFLAPNDADNKEVTKHEDAPQNQWKHWNWRSEGDLMLNGAFFTASGTGASSSYAKASSL
GARPSSLVSSLTAGAGALVCKKGSHC
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgttctatctatcccctgctttatccctcattataaaaagccctcctttgatctcagtt
tctcagaatttctctccctttgtacattcccacactttattaagcaataaaaagaaagct
ataatggcaatcccattgtcctttctactgcttttccctctcttggctcccacatttgtt
ttctcctcaccagttcaggaccccgagcaagtagtccaacaagtcaatgagagcataaga
aatgctactatggcgaggaggagcttggggtttctctcatgtggaaccggcaatcccatc
gatgattgctggcggtgcgaccatcattgggagaagaaccgtcagaagctagccgattgc
gccattgggttcggcaagcatgccattggtgggagagatgggaaaatatatgtggtgact
gaccctagtgaccatgaccctgttaatcctaaacctggaacccttcgatatgctgtcatc
caagatgaacctttatggatcattttcgctcgtgacatgaccatcaagttgaaggaagaa
ttgcttatgaactcgttcaagaccatcgacggccgaggcgtcagcgtccacatttccggt
gggccatgcattactgttcagtacgtgaccaacatcataatccatgggatcaacattcat
gattgcaagagaggagggaatgcttatgtgagggactctcctacccattacggctggagg
acgatatcggacggggacggggtatcgattttcggaggcagtcatgtttgggtggaccat
tgctctttgtctaactgcaacgatgggctgatcgacgccattcatggatccaccgccatc
accatttctaacaattacttgacccatcataacaaggtcatgctattgggacatagtgac
acttacaaacaagataagaacatgcaagtcaccattgcctttaatcactttggagaaggc
cttgtacaaagaatgcctagatgtaggcatggatactttcacgtggtgaacaatgattac
acgcactgggaaatgtatgcaatcggtggcagtgctgatcctacaatcaacagccaaggc
aatagatttcttgcaccaaatgatgcagacaacaaagaggtgacaaaacatgaggatgcg
ccgcaaaatcaatggaagcattggaattggagatcagaaggggatttgatgttgaatgga
gccttcttcaccgcatccggaaccggggcttcttcaagttatgccaaggcgtcgagcttg
ggtgcgaggccgtcatcactggtgagctcactcacagcaggagcgggtgcactcgtttgc
aagaaggggtcgcattgctag
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