Gossypium hirsutum (upland cotton): 107886484
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Entry
107886484 CDS
T04793
Name
(RefSeq) E3 ubiquitin-protein ligase ZNF598 isoform X1
KO
K22381
E3 ubiquitin-protein ligase ZNF598 [EC:
2.3.2.27
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107886484
Enzymes [BR:
ghi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107886484
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107886484
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAH_ZNF598
zf-C2H2_13
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
107886484
NCBI-ProteinID:
XP_016665950
UniProt:
A0A1U8HIR8
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Position
A11:113675382..113679598
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AA seq
769 aa
AA seq
DB search
MGSPFSTNLFCLQDFVFPLLGQIQRRPKIKKMDDSCAVCADTLEWVAYGPCGHREVCSTC
IVRLRFICDDYRCCLCKSELKTIFITKALGDYTKVINDFSAFPVDPIEGQVSSYWYHEGT
QAYFDDLDHYKMIKAMCRLSCTVCDKKDEQRNGGPKKRAEFKNIEQLKSHLFNRHRLLNC
SLCLEGRKVFMCEQKLYTREQLDKHIKTGDSVVDGTESERGGFTGHPMCEFCQNPFYGEN
ELYLHMSTEHFTCHICQRRHPGQYEYYRNYDDMEIHFSREHHLCEDETCRAKKFVVFATQ
SELKRHNTLEHGGRMSRSKRHAALQIPISFRYRRSCGQDHPVRGHVSHPDSSDSQLSLAM
QASFVTAGSFHSTSTSDQTVLNSEVASIVGPFEALATMDSVPSSRNCRALGNSRGGPLED
SSFPPLPAASNSSQQKVRNSLQGPARRSMAAPSRHRHNGTSNVVSNTAQGWPAVSFQPNM
SAAGTHQSRTVTKFSNLSTTNNSSGSSKSKPTRIKESLPKVEDFQSANKALVEKIRVSLE
FDQDKFSAFKGITGEYRQGFISTEEYLAYVHQFGLSHLVLELARLCPNVEKQRELVEIYN
FNISNSYSRNDDAGQWKNDKRSKKGKEKCEDYGSTDSKHTFAGEIHSGVKVLVEDGHHSH
TSKGKSKVLGDEDANSHVPPQSQVEPDVGGSKKILASQGGGNKQRKKVSKFLRNRLGDAL
AAQLEGGKCEIQEKTDENKEPPERLPVRSVWRDGGGQRLMAKTQRVASL
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgggttccccctttagcacaaatttgttctgtttgcaggatttcgtatttcctttgttg
ggtcagattcagaggaggccaaaaataaaaaaaatggatgatagttgtgctgtatgtgct
gacacacttgagtgggttgcatatgggccgtgtggccatcgagaagtatgttcaacttgc
atcgttcgtctccgattcatctgcgatgactaccgttgttgcctttgcaagtccgaactg
aaaactatctttattaccaaagctttgggagattatacgaaggtgataaatgatttctcg
gcttttccagttgatccgattgagggtcaagttagttcttactggtaccatgaagggaca
caagcatatttcgatgatctggatcactacaagatgataaaagcgatgtgcaggctatct
tgtactgtttgcgataaaaaggatgaacagcgaaatggtggaccaaagaagagagcagag
tttaagaacattgagcagcttaagagtcacttgtttaaccggcatagactgcttaactgc
agtctgtgtcttgaaggtaggaaggtctttatgtgtgagcaaaagttatatactagagaa
caactggataagcatataaagacaggtgattctgtggttgatggcactgaaagtgaaagg
ggaggttttacaggacatcctatgtgtgagttctgtcaaaatccattctatggcgagaat
gagctctacttgcatatgtctactgaacatttcacttgccacatatgccaaaggcggcat
cccggacaatatgaatactatagaaattatgatgacatggagatccattttagtcgggag
catcatttatgcgaggacgagacctgtcgtgccaaaaagtttgttgtttttgcgactcaa
tctgaattgaagaggcacaatactctcgaacacggtgggcgcatgtctcgttccaagcgt
catgctgcattgcagataccgataagtttccggtaccggcggagttgtgggcaggaccat
ccagtaagaggacatgtctctcatcccgattcatctgatagtcaactttcgttggctatg
caagctagtttcgtgaccgctggaagttttcattctacttcaacaagtgaccaaacggtt
ctaaatagtgaagtagcttctatcgttggccctttcgaggcattagctacaatggattcc
gtgccatcttcaagaaattgccgagcactaggaaactctaggggtggacctcttgaagac
tcgtcattccctccccttccagcagcatcaaatagcagtcaacaaaaagttagaaacagt
ttacagggaccagctagaaggagcatggctgctccctcacgtcaccgacacaatggaact
tcaaatgttgtttctaatactgctcagggttggcctgcagtgagctttcaacctaacatg
tccgctgctggtacgcaccagtccagaactgtgacaaaattttcgaatctatcaactact
aataactcatctggctcttccaaaagtaagcctactaggattaaggaatctttacccaag
gtggaagattttcaatctgctaacaaagctctagtggaaaagatccgtgtttctttggaa
tttgatcaggacaagttttctgcattcaaaggaataaccggtgaatatcggcagggtttt
attagcaccgaggagtatcttgcctatgtgcaccagtttggtttatcacatcttgttctt
gagctagctaggttatgccccaacgttgagaaacaaagagaacttgtggagatatacaat
tttaacataagtaacagctattctcgcaatgatgatgctggtcaatggaaaaacgataaa
aggtcgaagaaaggaaaggagaagtgtgaagactatggcagtactgattcaaaacatact
tttgcaggtgaaatccatagtggggtgaaagtattagtggaggatgggcatcacagtcac
acttccaaaggcaaatcaaaggttttgggtgatgaagacgctaactcacatgtcccacct
cagtctcaggtcgagccagatgttggtggctcgaagaaaattttggcatctcaaggaggg
ggaaataagcaacggaaaaaagtctccaagttccttagaaatcgccttggcgacgctttg
gctgcacaacttgaaggtggaaagtgtgagattcaagaaaaaacagacgaaaataaggaa
ccaccggaaagattgccagttcgcagtgtatggcgagatggtggtgggcagagactcatg
gcaaagacccaaagagtagcaagcctttga
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