Gossypium hirsutum (upland cotton): 107886586
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Entry
107886586 CDS
T04793
Name
(RefSeq) AMSH-like ubiquitin thioesterase 2 isoform X1
KO
K11866
STAM-binding protein [EC:
3.4.19.12
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
107886586
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ghi01002
]
107886586
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107886586
04121 Ubiquitin system [BR:
ghi04121
]
107886586
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
107886586
Peptidases and inhibitors [BR:
ghi01002
]
Metallo peptidases
Family M67
107886586
Membrane trafficking [BR:
ghi04131
]
Endosome - Lysosome transport
Others
Others
107886586
Ubiquitin system [BR:
ghi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
107886586
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JAB
Prok-JAB
Motif
Other DBs
NCBI-GeneID:
107886586
NCBI-ProteinID:
XP_040955673
LinkDB
All DBs
Position
A03:complement(99105785..99115806)
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AA seq
336 aa
AA seq
DB search
MFCNMDVVFFNPVYKGLHSSTMHQFVDGRETLKSIVVQDSSSQKIYSRLNVGEKKERICG
IPQTECQSLRIVIEERVGLASCNELDFVSSYRGHGSPCPIPDQATTTCKLFNVHAVTQSS
PSTILSFTEKASQTSHVSRVIDSDQQSSNEPEASRVLQNVHISTRLMEDFLELAKENTKK
DLETCGVLGAFLEKGTFYVTTLIIPKQESTSNSCQAINEEEIFAIQNERSLFPVGWIHTH
PSQSCFMSSIDLHTQYSYQVMVPEAFAIVVAPTDNSRSYGIFRVSEPNGMSLLKECQEKG
SQFHSHEETVDGSPIYERCTHVYKNSNLRFEIFDLR
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgttctgtaacatggatgtggtgtttttcaatccagtttacaaaggtcttcacagcagc
acgatgcaccagtttgttgatggacgagaaactttgaaatcaatagttgtccaagattca
agctctcaaaagatttatagccgtttaaacgtaggtgagaagaaggagagaatctgtggt
atacctcaaacagaatgtcaaagcttgaggattgtcattgaggaaagagttggactggca
tcttgtaatgaactggattttgtgagtagctacagaggacatggatcaccttgtccgatt
ccagatcaggcaaccactacatgcaagctcttcaatgttcatgctgtcactcaatcttcc
ccttctactatactctctttcactgagaaagcatctcaaacttctcatgtttcacgtgta
attgattcagaccaacagtcatccaatgaaccggaagcttctagggtgcttcagaatgtt
catatatcaacacgactaatggaggattttcttgaactagctaaggaaaacacaaaaaag
gatctggaaacctgtggtgttcttggtgcttttcttgaaaagggaactttctatgtaacc
actctgataatacctaaacaggaatcaacttcaaattcttgtcaagctattaatgaggag
gaaatttttgccatacaaaatgaacggtccctttttccagtgggatggatacatacacac
ccttctcagagttgtttcatgtcatcaatagatctccatactcaatactcgtatcaggta
atggtgcctgaggcttttgccatcgttgtggctcctaccgataattcaaggagttatgga
atattccgagtatctgaacccaatggaatgagtctcctgaaagaatgccaagagaaagga
tctcaatttcattctcacgaagaaacagtagatgggagccccatatatgaacgctgcact
catgtctacaaaaattcaaatctaaggtttgaaatctttgacctgcgctga
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