Gossypium hirsutum (upland cotton): 107886784
Help
Entry
107886784 CDS
T04793
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ghi01009
]
107886784
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ghi03021
]
107886784
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
107886784
Protein phosphatases and associated proteins [BR:
ghi01009
]
HAD phosphatases
Fcp/Scp phosphatases
107886784
Transcription machinery [BR:
ghi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
107886784
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
Motif
Other DBs
NCBI-GeneID:
107886784
NCBI-ProteinID:
XP_016666335
UniProt:
A0A1U8HJV7
LinkDB
All DBs
Position
A03:complement(105528865..105532850)
Genome browser
AA seq
695 aa
AA seq
DB search
MNKGSSSMAKDQSISVSEAVHKIQLHLLDGIRDDKQLISSGSLISRSDYEDVITERSISN
TCGYPLCRNPLPSEPRRRGRYRISLKEHRVYDLQETSRFCSADCLINSRAFAGSLQEERC
SVLNHAKLNAILSLFDDVDLNDKDLGKNGDLGFSNLKIKENEEIKAGEVSSVGPSNAIEG
YVPQRELVSKPSSSKNSKNGVFDSSSSKLGDIKGDYFVNNEIDFTSAVIMNNEYTTSKNP
GSLRQSQRTKPSSMKDVINEMDFTSEIIMNDEYTVSKTPPGSRQGSYGSKLEKTEGKGVC
KDFEEKCMRSESSSALTKEDSGIVQMPSTKCVDQSGLDTINAEAEKETHSDKAMASSGVV
LKSSLKPAGAKKLNRSVTWADKKNVDSARKGSLCEVKEMDAQKGDSENIGRAEDGDADDK
MLRFASAEACAMALSKAAAAVASGDSDVNDAVSEAGLIILPHPLEADKEEKVENIDTLEA
DPEPEEGPVKWPTKPGIPRSDFFDPEDSWFDAPPEGFSLTLSTFATMWNALFEWITSSSL
AYIYGRDETFHEEYLSVNGREYPQKIVLRDGRSSEIKETLAGCISRALPAIATALRLPIP
ISTLEQGMGRLLDTMSFVEALPAFRMKQWQVIVLLLIDALSVCRIPALTPHMTNGRMLLH
KVLDGAQISLEEYEVMKDLIIPLGRAPHFSAQSGA
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaggttcatcatcaatggcgaaagatcagtcaatctcagtttcagaagcagta
cacaagattcaactccatctccttgacggaatccgagacgacaaacaactaatctcctct
ggttccttaatttctcgaagcgactatgaggatgtcataaccgagaggtcgatttccaac
acttgcggttaccctctctgccgaaaccctttaccttccgaaccccgtcgaagaggccgt
tatcgaatctctttgaaagagcaccgagtttacgatttacaagaaaccagccgcttttgc
tccgccgattgcctgattaatagccgagctttcgctgggagtttacaagaagagaggtgt
tccgttttgaatcatgcgaaacttaatgcgattttgagtttatttgatgacgtggatttg
aacgataaggatttggggaagaatggggatttagggttttcgaatttgaagattaaagaa
aatgaggaaataaaagctggggaagtttcttcggtgggtccttccaatgctattgaaggc
tatgttccacaaagagaattggtttctaagccttcatcttctaagaacagcaaaaatgga
gtgtttgattctagcagttccaagctgggtgatatcaaaggagattattttgtcaataat
gagatagattttactagtgccgtaattatgaacaatgaatacaccacttctaagaatccc
ggtagtcttagacagagtcaaagaacgaagccgagtagtatgaaagatgtgattaatgag
atggactttactagtgaaataatcatgaatgatgaatatactgtttccaagacacccccg
gggtcaagacagggttcttatggttcgaaattggaaaaaacagaagggaaaggagtttgt
aaagacttcgaagaaaaatgtatgagatcagaatcctcctctgctttgacgaaagaggat
tctggcattgtacaaatgccttcaactaaatgtgtcgatcagagtggtttggatacaatt
aatgctgaagcagagaaggaaacccattctgacaaggccatggcatcaagtggggttgtg
cttaaatcctctcttaaacctgctggagcaaagaaacttaatcgctcagttacttgggct
gataaaaaaaatgttgatagtgctcggaaagggagtctttgtgaagttaaagaaatggat
gcacagaaaggagattctgaaaatattggcagagcagaagatggtgatgctgatgataaa
atgttacgatttgcatccgcagaagcttgtgctatggctttgagcaaggcagcggcagct
gtggcatctggagattctgatgtcaatgatgctgtttctgaagctgggctgatcatattg
ccacatccacttgaggcggacaaggaggagaaagtggagaatattgatacccttgaagca
gatcctgaaccagaagaaggccctgtaaagtggccaacaaaacctgggattccacgctct
gatttttttgacccagaggactcgtggtttgatgctccccctgagggtttcagtttaact
ctgtcaacttttgcaacaatgtggaatgcgctttttgaatggataacatcatcttctttg
gcttatatatatgggagagatgaaactttccatgaagagtacctgtcagttaatgggagg
gagtatccgcagaagattgtcttacgagatggtcgttcttctgaaattaaagaaactctt
gctggttgtatttctcgtgctttacctgctattgctactgctctcagactgcctataccg
atatctactttggagcagggaatgggccgcctgctagatacaatgtcttttgtggaagca
cttccagcattcagaatgaaacagtggcaagtaattgttcttctattaattgacgccctt
tcagtttgtagaataccagccctcactccacacatgactaatgggaggatgcttcttcac
aaggtgctggatggtgcccagataagtttggaagaatatgaggttatgaaggatctaata
ataccacttggccgagcacctcacttttctgcacagagtggagcttga
DBGET
integrated database retrieval system
