Gossypium hirsutum (upland cotton): 107886794
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Entry
107886794 CDS
T04793
Name
(RefSeq) nuclear cap-binding protein subunit 2 isoform X2
KO
K12883
nuclear cap-binding protein subunit 2
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03013
Nucleocytoplasmic transport
ghi03015
mRNA surveillance pathway
ghi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107886794
09122 Translation
03013 Nucleocytoplasmic transport
107886794
03015 mRNA surveillance pathway
107886794
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107886794
03041 Spliceosome [BR:
ghi03041
]
107886794
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
107886794
Spliceosome [BR:
ghi03041
]
Common components
Common spliceosomal components
Cap binding complex
107886794
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
DUF5721
Motif
Other DBs
NCBI-GeneID:
107886794
NCBI-ProteinID:
XP_016666350
UniProt:
A0A1U8HJX3
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All DBs
Position
A03:complement(105264786..105267322)
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AA seq
253 aa
AA seq
DB search
MASLFKDPAKLSAYRDRRFNGSQEEFEQALLTATTVYIGNMSFYTTEEQVYELFSRAGEI
KKIIMGLDKNSKTPCGFCFVLYYSREDAEDAVKYISGTILDDRPIRVDFDWGFVEGRQWG
RGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGAGSLGSFPPVMAPHYGRHG
GGHGHGGSYRHGRDYHRKRHRDDDHYARESSKRNSDHESRRASDHDARPEKNPRFRESGD
SDEEEDDDRKRRS
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atggcttctctgttcaaggacccagctaagctttcagcataccgagacagaagattcaat
ggttcgcaagaggaattcgagcaagcacttctcactgcgacaaccgtctacatcggaaac
atgtctttttacactactgaagaacaagtttatgagcttttctctagagccggtgaaatc
aagaaaattattatgggccttgacaagaactctaaaacgccttgcggcttttgctttgtc
ctgtattattctagggaagatgctgaggatgccgttaaatacattagtgggacaatcctt
gatgaccgcccgattcgtgtagattttgattggggatttgttgaaggaaggcaatggggc
cgtggtcgaagtggtggccaagtgcgagatgaatatcgaactgattacgatcctggcaga
ggtggttatggaaaattagttcaaaaagagttggaagcacaaagacagcttgtagattat
ggagctgggtcactgggctcattcccaccggttatggcccctcattatggtaggcatggt
gggggccatggtcatggtggttcttatcgtcatgggagagattaccatcggaagcgacac
cgagatgatgaccactatgcacgtgagtcctcaaagagaaactcggatcatgaatccagg
agagcctctgaccatgacgctagaccggagaagaatccacgtttccgagagagcggtgat
tctgatgaagaagaagatgatgatcgtaaacgacgatcttaa
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integrated database retrieval system
