KEGG   Gossypium hirsutum (upland cotton): 107886840
Entry
107886840         CDS       T04793                                 
Name
(RefSeq) LOW QUALITY PROTEIN: geranylgeranyl transferase type-2 subunit beta 1
  KO
K05956  geranylgeranyl transferase type-2 subunit beta [EC:2.5.1.60]
Organism
ghi  Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:ghi01006]
    107886840
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ghi04131]
    107886840
Enzymes [BR:ghi01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.60  protein geranylgeranyltransferase type II
     107886840
Prenyltransferases [BR:ghi01006]
 Protein prenylation
  Rab geranylgeranyltransferase
   107886840
Membrane trafficking [BR:ghi04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    107886840
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
    107886840
SSDB
Motif
Pfam: Prenyltrans SQHop_cyclase_N SQHop_cyclase_C
Other DBs
NCBI-GeneID: 107886840
NCBI-ProteinID: XP_040957124
LinkDB
Position
A03:complement(107196184..107198673)
AA seq 328 aa
MAELAVDKHFKYILSVEKNKDSFESVVMDHLRMNGAYWGLTALDLLGKLDSVNVDEVISW
ILKCQHESGGFSGNIGHDPHILYTLSAVQVLALFNKLDVLDIDKVATYITGLQNEDGSFS
GDMWGEVDTRFSYIAICCLSILCCLDKINVEKAVSYILSCKNLDGGFGCTPGGESHAGQI
FCCVGALALTGSLHYVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDR
VHWIDKEKLVKFXLDCQDVENGGISDRPDDAVDVYHTYSELLYLLPFCPFVAIVLFVCFH
EFNMRNSVYDARYCCRTLTSQLSRTESH
NT seq 987 nt   +upstreamnt  +downstreamnt
atggcggagctggcagttgacaaacattttaagtacatcttatctgttgaaaagaacaag
gatagttttgaatcggtggtgatggaccatcttagaatgaatggtgcatattggggatta
acagccctagaccttctggggaaacttgattctgttaatgtagatgaagttatttcatgg
atcctgaagtgccaacacgaatctggtggtttttctggcaatattgggcatgatccgcat
atactgtatacgcttagtgctgtacaagtgcttgccctattcaacaagctagatgttctt
gacattgataaggttgcaacttatattactgggttgcaaaatgaagatggatccttttca
ggcgacatgtggggtgaggtggatacgcggttctcttatattgccatctgttgcctttca
atattatgttgtctggataaaatcaatgttgagaaggctgttagctatattctgagttgc
aaaaacctagatggtggctttggatgcacacctggtggcgagtctcatgcagggcaaatt
ttctgttgtgtgggagctcttgctcttacgggatctctgcattatgttgataaggacctt
ctcgggtggtggttatgtgagcggcaagtcaaatctggaggtcttaatggccgccctgag
aaactccctgatgtttgctactcatggtgggttctatctagcttgatcatgattgacaga
gttcactggatagacaaggaaaagcttgttaagttcnatcttgactgtcaggatgtggaa
aatggtggaatttcagatagacccgatgatgctgttgatgtctaccacacatattcggag
ttgctgtatttactgccattctgcccattcgttgccattgttttatttgtttgttttcat
gaatttaacatgcgtaattctgtttatgatgctcgctattgttgtaggactctcacttct
caattatccaggactgaaagccattga

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