Gossypium hirsutum (upland cotton): 107886895
Help
Entry
107886895 CDS
T04793
Name
(RefSeq) chromatin structure-remodeling complex protein BSH-like isoform X5
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03082
ATP-dependent chromatin remodeling
ghi03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107886895
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
107886895
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ghi01009
]
107886895
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ghi03021
]
107886895
03036 Chromosome and associated proteins [BR:
ghi03036
]
107886895
Protein phosphatases and associated proteins [BR:
ghi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107886895
Transcription machinery [BR:
ghi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
107886895
SWI/SNF complex
107886895
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
107886895
PBAF complex
107886895
SWI/SNF complex
107886895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
GP70
Motif
Other DBs
NCBI-GeneID:
107886895
NCBI-ProteinID:
XP_016666485
UniProt:
A0A1U8I1H9
LinkDB
All DBs
Position
A09:73119693..73125967
Genome browser
AA seq
347 aa
AA seq
DB search
MKSPASASWKAPLKFRMPTAENLIPIRLDIEVDGQPYKDAFTWNPYDPDSEVVMFAKRTV
KDLKLAPGFLPQIVQSIQSQLATFQSYEGQDMYVGDLIIPIKLDLQVNHTVIRDQFLWDL
NNFDSDPEEFARTLCKDLGIEDPEVEPAIAFAIREQLYEIAIQNVTTARENRISKKGRRA
AEHFTPSKASGAALDLMKLFSFRSSVVRKRKDWDYYKPVLDLLSNEDVDALKAKEERSGW
LDIEVDGQCYKDVFTWKPYDPDSEVVMFAKKDCKRLEACQRTTILYINLLLYPLPLLGSV
GSSFTLSDRSRFLSLYMSPIFEICGFIFYMVSAAFVCCCWFFLFNHE
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcgccggcgtcagcttcatggaaagcccctctaaagttcaggatgccgacagct
gaaaatttaatacccattaggcttgacatagaagtcgatggacagccctataaagatgct
ttcacttggaacccttatgatccggattcagaggtggtgatgtttgcaaaaaggactgta
aaagacttgaagcttgcccctggtttccttccgcaaattgttcaatccattcagtcacag
cttgccacctttcaatcatatgaaggtcaagacatgtacgttggtgacctgatcattcca
attaagcttgatcttcaagtcaatcatacagttatcagggaccagtttttatgggacttg
aacaactttgatagtgatcctgaagaatttgctagaactctctgcaaagatttaggcatt
gaagaccctgaagttgagcctgcaattgcctttgcaattagggagcaactttatgagatt
gcaattcaaaatgtaactacagcaagggagaacagaataagcaaaaagggtcgtcgggct
gctgaacatttcactcccagtaaagctagtggtgctgcactggacttgatgaagttattc
agtttcagatcaagtgttgtccgtaaaagaaaggactgggattattataaacctgttctt
gaccttttatctaatgaggacgtggatgctctcaaagccaaagaagaaaggagtggctgg
cttgacatagaagtcgatggacagtgctataaagatgttttcacttggaagccttatgat
ccggattcagaggtggtgatgtttgcaaaaaaggactgtaaaagactcgaagcttgccaa
agaacaactatcctatacatcaacctccttttgtatcctctgcctttgttgggctctgtt
ggttcttccttcactttatctgatcgttcgaggttcctttctctctatatgtctccaatt
ttcgagatctgtggatttattttctatatggtttccgcggcatttgtctgttgttgctgg
ttttttttattcaaccatgaatag
DBGET
integrated database retrieval system
