Gossypium hirsutum (upland cotton): 107886917
Help
Entry
107886917 CDS
T04793
Name
(RefSeq) indole-3-acetic acid-amido synthetase GH3.6
KO
K14487
auxin responsive GH3 gene family
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
107886917
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GH3
GH3_C
GH3_M
Imm63
GNAT_acetyltr_2
Motif
Other DBs
NCBI-GeneID:
107886917
NCBI-ProteinID:
XP_016666506
UniProt:
A0A1U8HKC4
LinkDB
All DBs
Position
D02:66581968..66584440
Genome browser
AA seq
615 aa
AA seq
DB search
MPEAPKILSDSADCIDDIVVENNNKVLKFIEDVTADADEVQRRVLSEILSRSANVEYLQR
YGLNGCTDRETFKKVIPVVTYEDLKPDIERIANGDTSPILCSQPISEFLTSSGTSAGERK
LMPTIEEELGRRSLLYSLLMPVMSQFLPGLDKGKGMYFLFVKSEAKTPGGLVARPVLTSY
YKSSHFKNSPNDPYTNYTSPKETILCLDSYQSMYSQLLCGLFQNEDVVRVGAVFASGFIR
AIQFLEKHWSLLCKDIRTGTIDSKITDPSVREAVMKILKPNPKLADFVEAECSKGPWKGI
ITRLWPETKYIDVIVTGTMSQYIPALDYYSNALPLVCTMYASSECYFGINLNPLCNPSEV
SYTLIPNMAYFEFLPVTRKDELTGSISEPTALNDKEKQQLVDLVDVKLGQDYELVVTTYA
GLYRYHVGDILRVSGFKNKAPQFNFICRKNVVLSIDSDKTDEVELQNAVKNAANQLLQYE
ASLVEYTGYADTSAIPGRYVLFWELSVKDSTLIAPAVFEDCCFTVEESLNSVYRQGRVCD
KSIGPLEIRVVENGTFDMLMDFALSQGSSINQYKTPRCVKYAPIIELLNSRVISSYFSPK
CPRWTAGHKQWCTQN
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgccagaagctcccaaaatcttatccgactctgcggattgcattgatgatatcgtcgtg
gaaaacaataacaaggtgttaaagtttattgaagatgttactgctgatgctgatgaagtg
caaaggcgagttctgtccgaaattctctctcgtagcgccaacgttgagtacttgcaaaga
tatggtcttaacgggtgtactgatagagaaacgttcaagaaggtgatccctgtcgtcacg
tatgaagatttaaagccagatattgagcgtattgccaacggtgatacttcaccaattctc
tgctctcaacctatatcagagttcttaacaagttctggtacatctgctggtgagaggaaa
ctgatgccgacgatagaagaggaactggggaggagatcgctgctttatagcttgctgatg
cctgtgatgagccaatttcttccaggtttggataaagggaaaggaatgtattttttgttc
gtaaaatcagaagctaagaccccagggggactagtggctcgtccagtcttaactagctat
tataaaagctcacattttaagaatagccctaacgatccctacaccaactatacaagcccc
aaggaaaccattctatgcctagattcttaccagagcatgtactctcagttgctttgtggc
ctttttcaaaacgaagatgtcgttcgggtcggtgcagttttcgcttctggtttcattcga
gctatccagttcctcgaaaaacattggagtcttctttgtaaagatattcgaacaggaact
atagactctaaaatcactgatccatctgtaagggaagctgtcatgaaaatcctgaaacct
aaccccaagcttgctgattttgttgaggcagaatgtagcaaagggccatggaaaggaatc
ataactagactgtggcctgagactaagtacatagatgttatcgttacaggaaccatgtca
cagtacattcctgcactagattattacagcaacgccctcccccttgtttgcaccatgtac
gcttcatccgagtgttacttcgggattaatctcaacccactttgcaaccctagtgaggta
tcctacacccttattcccaacatggcgtatttcgagttcttgccggtgaccaggaaagat
gagttaaccggttccatctctgaaccaaccgccctgaatgacaaagaaaaacaacaactg
gtcgatcttgttgatgtcaaacttggacaagactatgagcttgttgtcacaacatatgct
ggtctttatcgttatcatgttggagacatacttcgtgtatcaggattcaagaacaaagcc
ccacaattcaacttcatatgtaggaaaaacgttgttcttagcattgattctgataaaacc
gatgaagtggaactgcaaaatgcagtgaaaaacgctgcaaaccaacttttgcaatatgaa
gcatctctggtagaatacaccggctatgcagacacatcggcaatccctggccgttatgtg
ctattctgggaactcagtgttaaagattcaactttaattgcgccagcggtttttgaggat
tgttgcttcacagttgaagaatcactcaacagcgtctaccgccaagggcgagtttgtgac
aagtctattgggccattggagataagggtagtggagaatggcacatttgacatgctcatg
gactttgctctaagccagggttcatctataaaccagtacaagacaccaaggtgtgtcaaa
tatgctcccattattgagcttctaaattcaagggtgatttcgagttatttcagtccaaaa
tgtcctagatggacagcgggtcacaagcaatggtgcactcaaaactaa
DBGET
integrated database retrieval system
