Gossypium hirsutum (upland cotton): 107886930
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Entry
107886930 CDS
T04793
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.4
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ghi04812
]
107886930
Cytoskeleton proteins [BR:
ghi04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
107886930
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Katanin_con80
WD40
Beta-prop_EML_2
DUF6011
WD40_Prp19
Beta-prop_TEP1_C
EIF3I
Motif
Other DBs
NCBI-GeneID:
107886930
NCBI-ProteinID:
XP_040951510
LinkDB
All DBs
Position
A03:108073957..108096708
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AA seq
832 aa
AA seq
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MPDFTAITGLDILLRIESLSLPSALYESKSRAVTQSCHAVIFCVAALWIDSVSDSSEVLV
AQCCKCCRTLTGHRSIALCGFPPFGEFFASVLLIRISRYGISERKVYHTYKAILEESYIS
LHQMADGLYLVARTHCEGGFECESFFGALIFIIHPLTFTGSADRTVKFWDLETFELIGSA
GPETTGVRCLTFNPDGRTVLCGLHESLKVFSWEPIRCHDGVDVGWSKLSDLNIHEGKLLG
CSYNQSCVGVWVVDISRIEPYAVGNANRVTGHSEPKSSSGGNLSVLNENTAKPSMGRFSV
SQNPDPLVKETKSLGRLSVSQNSDPAKESKTPGNAPGIPQRVNLNTAPRTTQPNSVTVPT
VAAPKRSSTKASVAISVPIFNKSDVIPVIVPRNDARLDQAAESRKEVGISGRSVEQAADS
RNEVGITGRNLEPSQLAAESRKEVGIAGKSLEPSQPAAESRKEAGIVGRTLEQGADSRKE
LGIVGRTMPFSLQSKTNSFRKFQNFKEDMDQPAISAASETTGSKASEFNSVLDRSIFSAV
RGPIQGISAAERNMREDRCIGSGKSEPNSAAELPSSYRDENHDAHVQKTHRDTYPLESLK
GGRTRPVVLNIEKRGRSSNYDGPIMSVSPKNASMANMPSVNVYKQRGYAASVEKEMPSAS
DGDAVADLMEQHDQFISSMQSRLAKLQAVHRYWERKDIKGAIGAIEKMADHAVLADVMSI
AIEKMDIVTLDICTCLLPLLSGLLGSDMDRHLSICLDMLLKLVRVFGSMIYSTISASTPV
GVDIEAEQRFERCNLCFIELEKVKRCLPTLSRRGGSVAKSAQELNLALQEVS
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgcctgattttactgctataactggtctggacattcttcttagaatcgagagtctctcc
ctaccatcagccctttatgaatctaaatcccgtgctgtcactcaatcatgccatgctgtg
atcttctgcgttgctgcattgtggatagattccgtgagtgattcttcagaagtcttggta
gcgcagtgctgcaagtgttgtcggactctgactggtcatagatccattgctctctgtgga
tttccaccctttggtgagttctttgcatctgttctcttgatacgaatctcaagatatggg
atatcagaaagaaaggtgtatcacacttacaaggccatactcgaggagtcatacatcagt
ttacaccagatggccgatgggttgtatctggtggcgaggacacattgtgaaggtggtttt
gaatgtgaatccttctttggtgctttgattttcattattcatcctctcactttcacaggt
tcagctgatcggactgttaaattttgggaccttgaaacctttgaacttattggttcagct
gggcctgagaccactggagtccgttgcttgaccttcaatcctgatgggaggactgtactg
tgtgggttgcatgaaagtctgaaggttttctcctgggaaccaataagatgtcatgatggt
gtggatgtgggatggtctaaattgtcagatcttaatattcatgaaggaaaacttcttggc
tgctcgtataatcaaagctgtgttggagtatgggttgtagatatctcgcgtatagagcca
tatgctgttggtaatgctaatcgtgtgactggtcactctgaacccaaatctagttcaggt
ggaaacctctccgtactaaatgagaacacagcaaaacctagtatgggaagattttctgtt
tcacaaaatcctgatcctttagtgaaggaaacaaaatcccttggaaggttgtctgtttca
caaaactcagatcctgccaaggagtccaaaaccccaggaaatgcacctggtatccctcag
agggtcaatttaaacactgctccaaggactactcaaccaaattccgtaactgttcctact
gtagcagctccaaagaggagttctacgaaggctagtgtggccatcagtgttccaattttc
aacaagtcagatgtcatacctgtgattgtgcctagaaatgatgctaggttggatcaggct
gctgaatcaagaaaagaagttggaatatctgggagaagtgtggagcaggctgctgattca
agaaacgaagttggaataactgggagaaatttagagccaagtcaacttgctgctgaatct
agaaaagaagttggaatagctgggaagagtttagagccaagccaaccggctgctgaatct
agaaaagaagctggaatagttgggagaactttggagcagggagctgattccagaaaagaa
cttggtattgttggaagaaccatgccattttctttgcagtcaaagacaaatagttttcgg
aagtttcaaaatttcaaggaagacatggaccagccagctatctctgctgcctctgaaact
acaggttctaaggcttctgaattcaacagtgtgctggacaggagtattttttctgctgta
agaggccctattcaaggaatatctgctgctgaaaggaatatgagggaagataggtgcatt
ggctctggcaagagtgaaccaaactcagcagcagagttgccttcaagctaccgggatgaa
aatcatgatgcacatgtgcaaaaaacacatagagatacatatcctttagaaagcctaaaa
ggaggaagaacacgtccagtagtcttaaatattgagaaaagagggagatcttctaattat
gatggacctattatgagtgtctctccgaagaatgcatcaatggcaaacatgccttctgtc
aatgtgtataaacaaagaggatacgctgcatctgtggaaaaagaaatgccttctgccagt
gatggggatgctgttgcagatctaatggagcaacatgaccaattcattagttccatgcaa
tctcgtttagctaagttacaggctgttcatcggtattgggaaagaaaagacataaagggg
gcaattggtgcaattgaaaagatggctgatcatgctgtgcttgctgatgtgatgagcatt
gccattgagaaaatggacatcgtcacattggacatttgcacttgtcttctgccacttctg
tctggtcttcttggtagtgatatggataggcatttgagcatctgtctggacatgctgctt
aagctggtcagggtatttggttccatgatatattcaaccatatctgcttctacacctgtt
ggtgtagacatcgaggcagaacagaggtttgagcgttgcaacctctgctttatagaactc
gaaaaagtaaaacgctgtctgcccactctttccagaagagggggatcagttgcaaaatct
gcccaggaattgaacctagcacttcaagaagtatcatga
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