Gossypium hirsutum (upland cotton): 107887081
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Entry
107887081 CDS
T04793
Name
(RefSeq) ATP-dependent DNA helicase Q-like 1
KO
K10899
ATP-dependent DNA helicase Q1 [EC:
5.6.2.4
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ghi03400
]
107887081
Enzymes [BR:
ghi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
107887081
DNA repair and recombination proteins [BR:
ghi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
107887081
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
Cas3-like_C_2
ResIII
Motif
Other DBs
NCBI-GeneID:
107887081
NCBI-ProteinID:
XP_016666706
UniProt:
A0A1U8HKX5
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All DBs
Position
A11:complement(113247523..113251871)
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AA seq
611 aa
AA seq
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MEDHDFKLEKARLLSLALEFGFDERLAKKSLDRLISLYGDDGRDFITVEHCGDDFLVALA
ETMEDSEDWDDDLQVVESEACGALNNMLDKNALPNTRSNSNTNVRNCINVIDDSPKRKKQ
TNLMELDSSSDEESLDAWISKKKGNFSTLSSRQDQSSRVDCRSSVTGGSISGQKQFFSTS
MGGNGTLSYDELQALDDVELANVVIFGNRSFRALQRQACKASLAKRDCFILMPTGGGKSL
CYQLPATLKPGVTLVISPLLSLIQDQIVTLNLKFGIPATFLNSQQTASQAAAVLHELRKD
NPSCKLLYVTPERVAGNQSFLEVLKCLHRKGQLAGFAVDEAHCVSQWGHDFRPDYRGLGC
LKQHFPNVPVTALTATATHSVREDILKALRIPNALVLKTSFDRSNLKYEVIGKAKDSLKQ
LGQLLQDRFKNQCGIVYCLSKNECAEVSNFLNEKCKIKTVYYHAGLASQQRVTVQKKWFD
GEVQIVCATIAFGMGIDKPDVRFVVHNTMSKSIESYYQESGRAGRDNCSAVCIALYQKKD
FSRVVCMLRNGQGCKSQSFKTAMAQAQKMRQYCELKDECRRKILLEHFGESFDRKACKNG
SNPCDNCLRTS
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggaagatcacgatttcaagctggagaaagctcggttgctgagcctggctcttgagttc
ggttttgacgaacgattggcaaagaagagcttagatcgtttgatctctctctacggtgat
gatgggcgagattttattactgtggagcactgtggagatgattttcttgtggcgttggct
gaaacaatggaagatagtgaggattgggatgatgatttacaggttgtggaatcagaagct
tgtggagctttgaataatatgcttgacaaaaatgcccttcccaatactagaagtaacagt
aataccaatgtgagaaactgcatcaacgtcatagatgattcgcctaaacgaaaaaagcaa
acaaatttgatggagttggattcttccagtgacgaagagagcttggacgcctggatttcg
aagaaaaagggtaacttttcgaccctctcttctcgtcaggatcaaagtagtcgtgtggac
tgtaggagtagtgtgactggaggttcaatttctggacaaaaacagttcttcagcacgtca
atgggtggcaatgggactctgagttatgatgaattacaggctttggatgacgttgaatta
gcaaatgttgttatctttggtaacagatcatttcgagcattgcagcgtcaggcttgtaaa
gcatctctggctaagcgagattgcttcattctcatgcctaccgggggtggtaaaagtctc
tgttatcagcttccggcgaccttgaaacctggtgttacactggtcatttctcctttacta
tctctaattcaggatcaaatagttacactgaaccttaagtttggaatacctgctacattt
ttgaattctcaacaaactgcttctcaagcagcagctgtcctgcatgagctaagaaaagat
aatccatcatgcaagcttttatatgtgactccagaaagggttgctggaaaccaatcattt
cttgaggtattgaaatgcttgcatagaaagggacaattggcaggttttgctgttgatgaa
gcacattgtgtgagccagtggggtcatgattttcgtccagactacagaggactaggatgt
cttaagcagcattttccgaatgttccagtgacagcattgacggccacagccacccattca
gtccgtgaggatattcttaaagcgttgagaattcctaatgctttagtcctcaagacaagc
tttgatagatccaatttgaagtatgaggtgattgggaaggctaaggattcattaaaacaa
cttggtcagcttctgcaagatcgttttaagaatcaatgtgggattgtatattgcctttca
aaaaatgaatgtgctgaggtttcaaattttctgaatgagaaatgcaagattaaaacagta
tattaccatgctggtttggcttctcaacaaagagtaactgttcagaagaaatggtttgat
ggagaggtccagattgtatgcgcaactattgctttcgggatgggaatcgacaaaccagat
gttcgtttcgttgtgcacaacacaatgtccaaatcaattgaaagttattatcaagagtcc
gggagggctggaagagataattgcagtgctgtatgcattgctttgtaccagaagaaggat
ttcagtcgggttgtatgcatgttacgaaacgggcaaggttgcaagagccaaagctttaaa
acagccatggctcaagctcagaaaatgcggcagtactgtgaactcaaggatgaatgccgg
agaaaaatcttactcgaacactttggagagtcttttgacagaaaagcttgtaaaaacggt
tcaaacccttgtgataattgtctcagaacttcctaa
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