KEGG   Gossypium hirsutum (upland cotton): 107887099
Entry
107887099         CDS       T04793                                 
Name
(RefSeq) histone deacetylase 5 isoform X1
  KO
K11406  histone deacetylase 4/5 [EC:3.5.1.98]
Organism
ghi  Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ghi03036]
    107887099
Enzymes [BR:ghi01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     107887099
Chromosome and associated proteins [BR:ghi03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     107887099
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 107887099
NCBI-ProteinID: XP_016666728
UniProt: A0A1U8HRY8
LinkDB
Position
A03:19623937..19634121
AA seq 667 aa
MMEVGSSGGKSNCNRMSDAKNERRVGLIYDQRMCKHRTPYGDDHPEKPDRITVIWNKLEL
AGIPQRCVILNAKDAKDEYICAVHSKNHVNLIRNISSKEYSKRNRIASKLNSIYLNEGSS
ESAYLAAGSVIEVAEKVAKGELNSAFAIVRPPGHHAEYDEAMGFCLFNNIAIAASFLLDQ
RPELGINKILIVDWDVHHGNGTQKAFWSDPRVLFFSVHRHEFGSFYPANFDGFYTMVGEG
PGAGYNINVPWENGRCGDADYLAVWDHVLVPVAKEFNPDIILVSAGFDAAVGDPLGGCRL
TPHGYSVLLKKLMDFAQGRIVLALEGGYNLDSLANSALACMEVLLEDKPISELSEAYPFE
STWRVIQAVRQVLSAYWPTLADKLPTKLTDQKAPPHILLSSSESDDEDDEASKIISKDLV
QAIEDVVEPISKLKIEDNHGNKVKNEVNSALWRSKLSKTDIWYASFGSNMWKSRFLCYIE
GGQVIGMKKLCSGSVDRNPPKETRWKAFPHRLFFGRDFTQTWGPGGVAFLDPRSNSEDKA
YVCLYKITLEQFNDVLLQENVPDHDMNSPLFDLNALDSILNEGSIPVEAVKRGWYHNVVY
LGKKDDIPILTMTCPLSVIESFKSGEIPLCAPSKDYADTLVRGLVEGKQLSEGDATTYIQ
VASTKPL
NT seq 2004 nt   +upstreamnt  +downstreamnt
atgatggaggtgggatcaagtgggggcaagagtaactgcaaccgcatgagcgatgccaaa
aatgaacggcgggtaggcttaatttacgatcagaggatgtgtaagcatcgaactccttat
ggcgatgatcatcccgagaaacctgaccgaatcaccgttatatggaacaagcttgaactc
gccggcattccgcaaagatgtgtgattttaaatgcaaaagatgccaaggatgaatacata
tgcgctgttcactccaaaaaccatgttaatctgattcgaaatataagctccaaagagtat
tcaaagcgaaatcggattgcttccaagttaaattctatatatttgaatgaaggatcatca
gagtctgcataccttgcagccggctctgttattgaggttgctgagaaagtggcaaaaggg
gaattgaattctgcttttgctattgttaggccacctggacatcatgctgaatatgatgaa
gcaatggggttttgtttattcaacaatatagccatagcagcaagttttctacttgatcaa
aggcctgaacttggtataaacaagattttgatagttgattgggatgttcatcatggtaat
ggtactcaaaaagctttttggagtgatcctcgtgttcttttcttttctgttcacagacat
gagtttggtagtttttaccctgctaattttgatgggttttacaccatggttggagaaggg
ccaggtgcaggatataatataaatgtcccttgggagaatggccgctgtggggacgctgac
tatctagcagtttgggaccatgttttagttcctgttgctaaggaatttaatcctgacata
attctagtatctgcagggtttgatgcagctgttggtgatcctctagggggatgtcggtta
acacctcatggatattccgttttgttgaagaagttgatggattttgctcaaggtaggatt
gtcttggcactagaaggaggatacaatcttgattctcttgcaaattcagccttagcttgc
atggaagttttgttagaagacaaacctatttccgaattgtctgaggcatatccatttgag
tctacatggcgagtaatacaagcggttcgtcaggtgttgagtgcatactggccaacatta
gcagataaactgccaacaaaattgaccgatcaaaaagctcctcctcatattttactatca
agctctgaatccgatgatgaggatgatgaagcttcgaaaatcatttcaaaagacctagtt
caagctattgaggacgttgtagaacccatttcgaagttgaagattgaagataatcatggt
aataaagtgaagaatgaagtaaatagtgccctgtggagatcaaagctatccaagactgac
atttggtatgccagtttcggatcaaatatgtggaagtcaaggttcctctgctatattgaa
ggtggacaggtcataggcatgaaaaagctgtgttctggttctgtggatagaaaccctcca
aaggagactcgctggaaagcttttcctcatcgtcttttctttggtcgtgattttacacaa
acttggggtcccggaggggttgctttccttgatcctcgaagcaacagtgaagataaagca
tacgtgtgcctctataagatcacgttagagcagttcaatgatgttctgctgcaggaaaat
gttcctgatcatgacatgaattctcctttatttgatctaaatgctttagactcaatactc
aatgaaggttcaattcctgtggaggctgtcaagagaggttggtaccataacgttgtctac
cttggaaagaaggatgatatacctatactgactatgacgtgtcccctctctgtgattgaa
agctttaagtcgggagagattcctttatgtgctcctagcaaagattatgctgacacctta
gtaagaggccttgttgaaggcaaacaactttcggaaggggatgcgacgacttacattcag
gtagcatccaccaaacccttatga

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