KEGG   Gossypium hirsutum (upland cotton): 107887148
Entry
107887148         CDS       T04793                                 
Name
(RefSeq) protein decapping 5 isoform X4
  KO
K18749  protein LSM14
Organism
ghi  Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ghi03019]
    107887148
Messenger RNA biogenesis [BR:ghi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     107887148
SSDB
Motif
Pfam: LSM14 FDF SM-ATX DUF1539
Other DBs
NCBI-GeneID: 107887148
NCBI-ProteinID: XP_016666788
UniProt: A0A1U8HS48
LinkDB
Position
A03:complement(56584679..56589638)
AA seq 625 aa
MNFICDTISNKQRRRPPSSQSETLISIFSVHFLSLLNSHVIARKKKRDRLMETGSSSTKS
GSTADSYIGSVISLTSKSEIRYEGVLYNINPDESSIGLKNVRSFGTEGRKKDGPQVPPSD
KVYEYILFRGSDIKDLQVKSSPPAQPTPSINDDPAIIQSQFPHPVSTTTSALSAATRPLT
DPATRAAQMGLPGSNYQAALPLYLPGGNLRSWGASPPPPAANGNELPMPMYWEGYYGPPN
RPPHLHHQSLLRHSPGQSMPPFMQQPMQYPNFNAPFPIGLGNLQSSSLPEAPPPLFPSST
GSPNVTSTSSDLPPAPSASLASEALLNKAPSPAISPAALGASLPAISPLTTGPELNPIVP
PIAHKPITNPTFLHQTTSQAASSIIGVLNSVSMETPTPSMVTPGQLLESGTAVVPSPQPD
ATVHKDVEVVQVFSSPTEPSAPVVSEAQPPILPLPRAAHKPNGPSFQPRHGYRGRGRGRG
TWNSRPVTKFTEDFDFIAMNEKFKKYEVWGHLGKSSKSNSKDKEGDASDEDGYQDEDDAE
TSKVQAKPVYNKDDFFDTLSCNALDNNTQNGRPRFSEQMKLDTETSGFFSGHRGGRGGRF
GGGYHGRGYGHVGRGSGRAMSMRAP
NT seq 1878 nt   +upstreamnt  +downstreamnt
atgaattttatctgcgatactatctcaaataaacaaaggcgtcgtccacccagttcacaa
tctgaaaccctaatctctatcttttcagttcactttctctctctattaaattctcatgtt
atagcaaggaagaagaaaagagatcggttaatggagacgggcagttcgagtacgaagtcg
ggttcaacagccgattcctacattggaagcgtaataagcttaacttccaagagtgagatc
agatacgagggcgttctttacaacatcaaccctgacgagtccagtattggattaaaaaac
gtacgatcatttggaactgaaggaaggaaaaaagatggtccgcaagtacccccaagtgac
aaagtttatgagtacatattattccgcggaagcgacattaaggatttacaagttaaatct
tcaccacctgcacagcctaccccatccataaatgatgatcctgcaattatccagtctcag
tttccgcacccagtttccacaactacaagcgcgctttctgctgctacccgacctttaacc
gatcctgctacacgtgctgctcaaatgggactaccggggtctaattatcaagcagcccta
cctttatatctacctggagggaacttacgttcatggggggcatcgcctccacctccagct
gctaatggtaatgagcttcctatgccaatgtattgggaaggatactatggtcccccaaac
cggcctccacatttgcaccatcaatctttgcttaggcactctccaggacaatcaatgcca
cctttcatgcagcaaccgatgcaatatccaaattttaatgccccttttcctattggactt
ggcaacttacagagttcaagtttgcctgaagctcctcctcctttatttccttccagtaca
ggttcccctaatgtaacttctacgtcgtctgatttgcctcctgcaccctctgcttcacta
gcttcagaagccttgcttaataaagctccaagtcctgcaatttctccagctgctcttggt
gctagcttaccagcaatttctcctttgactactggtccagaattaaatcctattgtacca
ccaattgcccacaagccaattacgaatcctacctttttgcatcaaactacttctcaggct
gcatcctctataattggggttttgaattccgtttccatggaaacacctacaccatcaatg
gtgacccctggtcagctcttagagtcgggaacagctgttgttccttcaccacagcctgat
gcaactgttcataaagatgtagaagtggttcaagtgttctcgtcaccaactgaaccatca
gcacctgttgtctcagaagctcagcctccaatattgccattacctcgtgctgcccataag
ccaaatggaccttccttccaacctcgtcatggttatagaggacgtggacgaggaagagga
acttggaattcacgtccagttacaaaatttactgaggacttcgatttcattgcaatgaat
gagaaattcaagaaatatgaagtatggggtcatcttggtaagagtagcaaatcaaattct
aaggataaagaaggggatgccagtgatgaagatggttatcaagatgaagatgatgccgaa
acatctaaggttcaagccaagcctgtttacaataaggatgacttttttgatactctctcc
tgcaatgcccttgataacaacacacaaaatggaaggccaagattctctgagcagatgaaa
ttggacacagagacttctggttttttttcaggacatcgaggtggacgtggtggtcgcttt
gggggtggttatcatggaagagggtatgggcatgtggggaggggtagtgggcgagctatg
tctatgcgagctccatag

DBGET integrated database retrieval system