Gossypium hirsutum (upland cotton): 107887221
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Entry
107887221 CDS
T04793
Name
(RefSeq) flap endonuclease GEN-like 1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ghi03400
]
107887221
DNA repair and recombination proteins [BR:
ghi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
107887221
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GFIT
Motif
Pfam:
XPG_I
XPG_N
Motif
Other DBs
NCBI-GeneID:
107887221
NCBI-ProteinID:
XP_016666885
UniProt:
A0A1U8HLF8
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Position
A08:103775697..103779019
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AA seq
611 aa
AA seq
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MGVGGKFWELLKSYARFEGFDFLRDKKVAIDLSFWIVQHETALKNQALNPHLRLTFFHTV
NLFSKFGVFPVFVLDGTPSPLKSQARMVRFFRFSGIDASTSNVAEEGVSKERNSTFKKCV
NDCVELLELLGMPVLKANGEAEALCARLNRDGHVDACITADSDAFLFGATCVIKSLRPNS
KEPFECYNMSDIEAGLGLKRKHLIAVSLLVGNDHDLNGVQGIGLDKALRLVRGFSEDEIF
DKLYEIGKGHVPLFQGEIRCAADATPCSDESSPKAKQSHCSFCGHPGSKKAHFKSCCEYC
ITDSNEGCLKKSQGFKCNCSSCDKVRKDKDKKKHENWWINVCNLISKETKFPNDEIIEMY
MCNNHGEFTEKGPLLEWGDPKTDLLVDFLAYHQSWQPSYIRQRMLPMLSTLYLRELARNP
NKTLLVGQYEFHSIQRVKIRYGHQYYEVKWKKAISNELSCAVPVEQSNMLEEEFTEVDDE
PIGLLDESIEPQIHVDGCWILTDENPELVLSAFPEEALKFRQEKELKVMKRRKISTPRSE
GSSEMSESSKPQGVQLSITEFYRTTKTPSQAKLGEDLVKQSSSPGVGSSKQKRKVSGSKL
SKAVRRRLLFG
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgggggtgggaggcaaattctgggaacttctaaaatcctacgctcgattcgaaggattc
gatttcttgagagacaaaaaggtcgccattgatctctccttttggatcgttcagcacgag
actgccttaaaaaatcaagctttgaaccctcatctcaggcttactttcttccatactgtt
aaccttttctctaagtttggagtctttccggtgtttgttttggacggaactccgtcgccg
ttgaaatctcaagcaaggatggttcggtttttccgtttctccggcattgatgcttcaact
tcgaatgtggccgaagagggtgtttccaaggagaggaactcgacatttaaaaaatgtgtt
aatgactgtgttgagctgcttgaactattgggaatgccagtgttgaaagctaatggtgag
gctgaagcattgtgtgctcggttaaatagagatggtcatgttgatgcttgtattactgct
gacagtgatgcattcctctttggggctacttgtgttattaaaagtcttaggcctaattca
aaagaaccgtttgaatgctacaatatgtcggatattgaagctggtcttggactgaagagg
aaacacttgatagccgtctctcttttggttggaaatgaccatgacctaaatggcgtgcaa
gggattgggcttgataaagcacttcgtttggtacgagggtttagtgaagatgagatattt
gataaattatatgaaataggcaaagggcatgtaccactatttcagggtgaaattagatgt
gctgctgatgctacaccttgttcagatgagagctcaccaaaggcaaagcagtctcattgc
tctttctgtgggcaccctggcagcaaaaaggctcattttaagtcttgttgtgaatattgt
attactgatagcaatgaaggttgcttgaaaaagtctcaagggtttaagtgcaactgctca
tcctgtgataaggttagaaaagacaaggacaagaagaaacatgagaattggtggattaat
gtttgcaacttgatttccaaggaaacaaaattcccaaatgatgagatcattgaaatgtac
atgtgcaacaatcacggagagtttactgaaaaaggccctttgctggaatggggagatcca
aaaactgacttgctagttgatttcttagcttatcatcagtcatggcagccgtcttatatt
cggcagcggatgcttccaatgctgtccaccctgtatttgagagagttggcgagaaatcca
aataagactttgttagttgggcagtatgagtttcattctattcaacgtgtgaagataaga
tatgggcatcaatattacgaggtcaagtggaagaaagccatatctaacgaacttagttgt
gcagtccctgttgaacagtccaacatgcttgaagaagaattcacagaagttgatgatgag
cccattggcctgttggatgagtcaattgagccccagattcatgttgatggatgctggatt
ttaaccgatgaaaatccagagttagttctttctgcttttccagaagaagctctcaaattt
agacaagaaaaggaactaaaagttatgaagagaagaaagatttcaacaccaagatctgaa
gggtcctccgagatgtcagaatcatcaaagccacaaggtgttcaattaagtatcaccgaa
ttttaccgtacaaccaaaacaccatcccaggcaaaactaggggaagatttagtcaaacag
tcaagtagtccaggtgttgggtcatcaaaacagaagaggaaagtttcaggttctaaattg
tccaaggctgtaagacgacgccttttgtttggttaa
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