Gossypium hirsutum (upland cotton): 107887232
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Entry
107887232 CDS
T04793
Name
(RefSeq) protein transport protein SEC23
KO
K14006
protein transport protein SEC23
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107887232
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107887232
Membrane trafficking [BR:
ghi04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
107887232
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Vps36-NZF-N
Motif
Other DBs
NCBI-GeneID:
107887232
NCBI-ProteinID:
XP_016666900
UniProt:
A0A1U8HLH3
LinkDB
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Position
A03:50675587..50684760
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AA seq
769 aa
AA seq
DB search
MANSDPEGVDGVRMTWNVWPRTKLEASKCVIPLAASIAPIRPHSDIPTLPYAPLRCRTCS
AVLNAYSRVDFLAKIWICPFCYQRNQFPPHYAMISETNLPCELYPQYTTVQYTLQMDPYP
NNPSNAPQLQPVFVFVLDTCMIEEELVFAKSALKQAIGLLPEQALVGFVSFGTQALVHEL
GFTEMSKVYVFKGSKEIPKEQVLEQLGLRAAGGRPTAGYPKGLQNGFTNTVVNRFLLPAS
DCEFTLNSLLDELQTDQWPVQAGHRASRCTGVALSVAAGFLGACLPGTGARIIALVGGPC
TEGPGTIVSKDLSEPLRSHKDLFKDAAPYFKKAVKFYDSLAKQLVDQGHVLDLFASALDQ
VGVAEMKVAIERTGGLVVLAESFGHSVFKDSFKRVFEDGEQSLGLCFNGMLEIGCSKEIK
VQGIIGPCTSLEKKGPNVSDTVIGEGNTTTWKMCGLDKSTCLTVIFDLSSTDQSNVPETV
NPQFYLQFLTSYQDPEGKTLIRVTTVTRQWADISVSTEELIHGFDQETAAIVMARITSLK
METEEGFDATRWLDRNLIRFCSKFGNYRENDPSSFSLNPCFSLFPQFIFNLRRSQFVQVF
NNSPDETAYFRVLLNKENITNAAVMAQPSLISYSFNSPPQPALLDVASISADHILLLDSY
FSIVVFHGMTIAQWRNMGYQNQPEHQAFALLLEAPQVDAQIIIRDRFPVPRLVVCDQHGS
QARFLLAKLNPSATYNNATDIAQGSDIIFTDDVSLQVFCEHLQRLAVQS
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atggcgaactccgatcccgaaggggttgacggcgtacggatgacatggaacgtctggcct
cgcaccaagcttgaagccagcaagtgcgtcattcccttggccgcttccatcgctccgatc
cgccctcactcggacattcctactctcccttacgctcctctccgctgccggacatgttcc
gctgtcctcaacgcctattcgcgcgttgatttcctcgccaagatctggatctgtccgttt
tgttaccagcgcaaccaatttccgccgcattatgccatgatctccgaaacgaacctgcct
tgcgaactctacccgcaatataccaccgtgcaatacacgcttcaaatggatccctacccc
aacaacccttccaatgctcctcaattgcagccggtttttgtttttgtgttagacacttgt
atgatcgaggaagagctagtgtttgctaaatcggcgttgaaacaggctattggattgttg
ccggaacaagctcttgtcggtttcgtatctttcgggactcaagcacttgtccatgaattg
gggttcacggaaatgtcgaaggtctatgttttcaaggggagtaaggagattcccaaggag
caggttttggagcaattaggcctccgtgctgctggggggcggccaacggctggatatccg
aaaggactgcaaaatggatttacgaatacagttgttaatcggtttttattgcccgcttct
gattgtgaattcacgctcaattcactcttggatgagttgcaaacggatcaatggcccgta
caagcgggacacagggcgtctaggtgcactggagtggccttaagtgttgcagcaggattt
cttggggcctgcttgcctggtactggtgctaggattattgctttggttggtgggccatgt
actgaagggccaggcacgattgtatccaaagacttgtcagaacctttacgttcacataaa
gatctttttaaggatgctgcaccatattttaagaaagcagtcaaattttatgatagtctt
gcaaaacaactggtcgaccagggtcatgttcttgacctttttgcatctgcacttgatcag
gttggagttgctgaaatgaaagttgcaattgaaaggacaggtggacttgttgttctagct
gaaagttttggtcattctgtattcaaagactctttcaagcgtgtctttgaagatggggaa
cagtctcttggcctatgttttaatggcatgcttgagataggttgttcaaaagagatcaag
gttcagggaatcattggaccttgcacatcattggagaagaaaggacctaatgtttctgac
acggtcattggggagggtaacacgacaacatggaaaatgtgtggccttgacaagagtact
tgcttgacagttatatttgatctttcatcaactgatcaatcaaatgttccagaaactgtg
aatccacagttctatttgcagtttctaacaagttatcaagaccctgaaggtaaaacactt
attcgagttacgactgtgacaagacaatgggcagacatttctgttagtactgaggaatta
atacacggtttcgatcaagagactgcagctattgtgatggcacgaataacttccctgaaa
atggagacagaggaggggtttgatgctacaaggtggttagatcggaatctcattcgattt
tgttccaaatttggcaactaccgggagaatgatccatcatctttttcattaaacccttgc
ttttctttgtttcctcaatttattttcaatctacggcggtcacaatttgtacaggttttt
aacaacagtcctgatgaaactgcatattttcgcgtgttgttaaacaaggaaaatattact
aatgcagcagttatggctcaaccatcattaatatcatattcgttcaactcaccaccccag
ccagcattattagatgtggcttcgatttctgctgatcatattctcttgctggattcatat
ttcagtattgttgttttccatggtatgacaatagcacagtggcgcaacatgggttaccag
aatcaacccgaacatcaggcatttgcacttcttttggaagcaccccaggttgatgcccaa
attattattcgggaccgctttcctgtccccagattggttgtatgtgatcagcatggatcc
caggcaagatttttattggcaaagttgaacccatcagccacctacaataatgccaccgac
atagctcaaggatcagatataatctttacagatgatgtaagcttacaagtcttctgtgag
catcttcagagattggctgtgcaatcttga
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