Gossypium hirsutum (upland cotton): 107887234
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Entry
107887234 CDS
T04793
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 2-like
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
107887234
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ghi01002
]
107887234
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107887234
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
107887234
Peptidases and inhibitors [BR:
ghi01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
107887234
Ubiquitin system [BR:
ghi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
107887234
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
UPF1_Zn_bind
SpeFL
Motif
Other DBs
NCBI-GeneID:
107887234
NCBI-ProteinID:
XP_016666902
UniProt:
A0A1U8HLH4
LinkDB
All DBs
Position
A03:50255664..50263089
Genome browser
AA seq
1005 aa
AA seq
DB search
MGKRVKKNRRVPPKEKKVVAAQSPKAIPQEKPASIDDVDDEIKAVKERKKCLHFNKGINI
DKLLTKLRSSDPIRCEDCREGRNDRRGGKGKSKHGKKKGSASVESKRESKAIWVCLECGH
YVCAGVGLPTASTSHAVRHLRQTRHHLVVQWDNPQLRWCFSCSIFIPVEKMEENSESKDV
LYEVVKLIKERSSESSTNAVEDVLSGSGSVACDIKSEGTISNSLDGKNGYVVRGLVNLGN
TCFFNSVMQNLLALNRLRDYFSNLDVSMGQLTISMKKLFAEIRPEMGLRNAINPKPFFAS
LCSKAPQFRGYQQHDSHELLRCLLDGLYTEELALKKHINASKSDAVTASQDLTFVDAVFG
GQISSTLCCEECGHSSTVYEPFLDLSLSVPTKKTPSKKAQPVSRARKTKLPMKKVGRNRG
KVNKDVDQVPAQVVTAPVPNSESSGPSHIAVPQTEPKVASSGDSPLSHAAGPSTKADESS
SASRNLFDVVESQKEQVVESTVKENSAGTDDFAWLDYLTTENTLPENDAGADDFSWMDYL
QQEIVADESDLISQNNNTSLQDSEEKELVPNAALAESCEVSVLEGETNKKTEDSSGNLQE
ELPLLVQDSVVLLLPYKEDIPGTESVRENEASSSNAGLGQEEVEFDGFGDMFNEPEIAEG
PIIGPSLANEVAETGFMAGSISDSDPDEVDDSNSPVSVESCLSHFIKPELLLDDNAWNCE
NCAKILRHQKLKAKKKQTKMGKDLLNGSETRSLDMEHQCPNGVRTISNGDISSSGDSSVF
HNKNQNGVKVENGQTSELDSVELEDASPLKLNSSVSSKCYAQEKCGGTLTIDSCNVENHS
GNDTFHQSNSHMTENCQSGISDDEELDSENVKVKRNATKRVLINKAPPVLTIHLKRFCQD
ARGRLSKLNGHVNFRETIDLRPYLDPRGEDADNCNYSLVGVVEHSGTMRGGHYIAYVRGG
EKRKGTIDIDHVGSQWYYVSDQHVRQASIEEVLRCEAYILFYEKV
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atggggaaaagagttaaaaagaatcgtcgagtacctccgaaggagaaaaaggttgtggca
gctcaatctccaaaagctatacctcaggagaaacctgccagtattgatgatgttgacgat
gaaattaaagccgtaaaagagaggaaaaagtgcctgcattttaataaaggcatcaacata
gataagttgttgactaaacttaggtcatcagatcccataaggtgtgaagattgtagggaa
ggcagaaatgataggagaggaggtaagggaaagagtaaacatgggaagaagaagggaagt
gcttcggttgagtcgaaacgtgaatcgaaagccatttgggtttgtttggagtgtggacat
tatgtatgcgctggagttggtttgccaacagcttctacctcacatgctgttcgacatctt
agacaaacccgtcaccacttggtggttcaatgggataatcctcaattgaggtggtgcttc
tcttgcagcatattcattccagttgagaaaatggaagagaacagtgaaagcaaagatgtt
ttatatgaggttgtaaaattgattaaggaacgatcatctgaatcatccacaaatgctgtt
gaggatgttttgtcaggaagcggcagtgttgcttgtgatatcaaatcagaaggaactata
tcgaattctttggatggaaaaaatggttatgtggttcgaggtttggttaatctcggtaat
acgtgcttctttaattcagtaatgcagaatcttctggctctgaataggctaagggactac
ttctcgaatctggatgtgtccatggggcagttaacaatttctatgaaaaagctttttgct
gaaataagacctgagatgggcttgagaaatgctatcaatccaaagccattttttgcatcc
ctttgttctaaggctccccagtttagaggctatcagcaacatgacagtcatgaattgctt
cgttgcttacttgatgggctttatacagaggagttggctctaaaaaaacacattaatgct
tctaaaagtgatgcagttactgcaagtcaggatcttacttttgtggatgctgtatttggg
ggtcaaatttcgagtactctctgttgtgaggagtgtgggcactcgtcaacagtgtatgaa
ccatttctagatctctcactttcagtgccaactaagaaaaccccttctaaaaaggctcaa
ccagtctctcgagcaaggaaaacaaagctgccaatgaaaaaagttggcaggaatagagga
aaagttaacaaagatgtagatcaggtgccagctcaagttgttacggctcctgtacctaac
agtgaatcttcaggcccaagccatatagctgtgccccaaacggaacccaaggtggcatca
tctggtgattctccactctcacatgctgctggcccaagcaccaaggcagatgaaagcagt
tctgcttcaaggaatctctttgatgttgtggagtctcagaaagaacaagttgtggagagt
acagtgaaggaaaattcagctgggacagatgattttgcttggttggattacctcacaaca
gagaatacactcccggaaaatgacgctggtgcagatgatttttcttggatggattatctg
caacaggaaatagtagctgatgagagtgacttgatttctcaaaataacaatacttccctt
caagattcggaggaaaaggaactagttccaaatgcagctttagcagaaagttgtgaggtt
tctgtacttgagggggaaaccaataaaaaaacagaagattcttctgggaaccttcaagag
gagcttccattgctggttcaagattctgtggttcttttgcttccatataaagaggatatt
ccaggtactgagagtgtgagagaaaatgaggcctcttcatcaaatgcgggtcttggacaa
gaggaagtggagtttgatggctttggtgacatgtttaatgagcctgaaattgctgaaggg
cccatcattggaccatctttggcaaatgaagttgctgaaactggttttatggctgggagt
attagtgattctgatcctgatgaggttgatgacagtaattctccagtatccgtggaaagt
tgtttgtctcacttcataaagccggagcttcttttggatgataatgcttggaattgtgag
aattgtgcgaaaattttgcgacatcagaagttgaaagcaaagaagaagcagactaaaatg
ggaaaggatttactcaatggaagtgagacccgaagtttagatatggaacaccaatgccct
aatggagttagaaccattagtaatggcgatatcagtagttccggtgatagctcggttttt
cataacaagaatcaaaatggtgtaaaagttgaaaatggtcaaacaagcgagctagattct
gttgaattagaagatgcaagtccgttgaaattaaattcttcagtttcctctaaatgttat
gctcaagaaaaatgtgggggtaccctaactattgattcttgcaatgttgaaaatcatagt
ggtaatgatacctttcatcagagtaattcacatatgactgaaaactgtcaatcaggcata
agtgatgatgaagagttagactccgaaaatgtgaaggttaagagaaatgctacaaagagg
gtcctcataaacaaggcaccgcctgttctgactattcatttgaagaggttttgtcaagat
gcccgtggtcgtttgagtaaattgaatggtcatgtcaatttcagagagacaattgatctt
agaccatatctggatcccaggggtgaagatgcagataattgcaattacagtctggtgggg
gttgtggagcattcgggaacaatgagaggtggtcactacattgcgtatgtgagaggaggt
gagaaaaggaaagggacgatcgatatcgaccatgttggatctcaatggtattatgtgagt
gatcaacatgttcgccaagcatcaatcgaagaagttcttcgctgcgaggcatacatttta
ttctacgaaaaagtttga
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