Gossypium hirsutum (upland cotton): 107887246
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Entry
107887246 CDS
T04793
Name
(RefSeq) zinc finger CCCH domain-containing protein 64-like
KO
K24939
CWF19-like protein 1
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ghi03041
]
107887246
Spliceosome [BR:
ghi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
107887246
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CwfJ_C_1
CwfJ_C_2
zf_CCCH_4
zf-CCCH
Torus
zf-CCCH_4
Ap4A_phos_N
zf-CCCH_3
zf-CCCH_9
Motif
Other DBs
NCBI-GeneID:
107887246
NCBI-ProteinID:
XP_016666923
UniProt:
A0A1U8HSJ0
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All DBs
Position
A06:complement(18261934..18267461)
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AA seq
607 aa
AA seq
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MASPRILLCGDVLGRLNQLFKRVNSVNKSAGPFDALFCVGQFFPDEPDRLDELMDYVERR
AQVPLPTYFIGDYGVGAPKVLSAVSRNSANQGFKMDGFKVCDNLFWLKGSGKFTFHGLSV
AYLSGRQLSNGQQFGTYSQIDIDTLRAFAEEPGIVDFFLSNEWPSGITNRATVSDIPAGI
SDSSGSDSTVSQLVAEIKPRYHIAGTKGAYYAREPYFNVDAVHVTRFLGLASVGNKEKQK
FLHALSPTPSSAMAAAEISAKPPNTTLSPYTLVDQVDRRKETTKRASDIELDSQYWRYDV
SNKRQKHGNGDTNKVCFKFISSGTCPRGEKCNFPHDADAREQFLRGVCLDFIIKGKCEKG
PACNFKHSLQDDGENHSRKRPGSSNTNANRSKECWFCLSSPNVESHLVTSIGENFYCALA
KGPLVQDHVLIIPVEHMPNTLSLPADSETELGKFQNSLKLYYKNQGKEAVFFEWISIRGT
HANLQAVPVPSSKAAVLKDIFTLAAEKLGFEFVTKKFSNNSEGRKWLRTQFDKNFSCFYV
ELPEGSILLHLIEENEKFPAQFGREVVAGLLNVADRADWRNCTIGKDEETKLAENFKKRF
QVFDPSQ
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggcttctcccagaattctactatgcggggacgttttaggccgtctcaaccagctcttc
aagcgagtcaactctgtaaacaaatcagcgggtcctttcgatgctcttttttgcgtgggt
cagttcttccccgatgaaccagatcggcttgatgaattaatggactacgttgaacgccgg
gcccaagttcctctcccgacttacttcatcggcgattacggagttggtgcacccaaggtt
ttgtcggctgtttcgagaaactccgctaaccaaggtttcaaaatggacggtttcaaggtt
tgcgacaatttgttttggttaaaaggcagcgggaagttcactttccatggtttgtctgtg
gcttacttatccggtaggcagttgtctaatgggcaacagtttggaacatatagtcaaatt
gacattgacaccctacgagcattcgccgaggaacctggaatagttgatttctttttaagt
aatgaatggccaagtggtatcacaaatagagccactgtatcagatatccctgcaggaatc
tcagattcttctggcagtgattccactgtctcccaactagttgcagagatcaaaccacgc
tatcacattgcaggtactaagggtgcatattatgctcgtgaaccttattttaatgttgat
gctgtacatgtaactcggttcttgggtcttgcatctgttgggaataaagagaaacagaaa
tttcttcatgcgctttctccaactccatcatctgccatggcagctgctgagatcagtgca
aagccaccaaatactaccttatcaccgtatacattagttgaccaagtggatcgtcgtaaa
gaaaccacaaagagagctagtgatattgaacttgattcgcaatactggagatatgatgtg
tcgaacaaacgacaaaagcatgggaatggtgatactaataaggtgtgttttaaatttata
tcctctggaacttgtccgcgtggagaaaagtgcaacttcccacatgatgctgatgcaagg
gaacaatttttgagaggtgtttgtcttgactttattatcaaaggaaagtgtgaaaaaggc
cctgcttgcaactttaagcacagtttacaggatgatggtgagaatcattctcgaaaaaga
ccgggatctagcaatactaatgctaacagatcaaaagagtgctggttttgtttgtcaagc
ccaaatgtggagtcacatctggtaacaagtataggagagaatttctactgtgcactagcg
aaaggcccacttgtccaagatcacgtactgataattccagttgagcatatgccaaatact
ctttctctaccagcagatagtgaaactgaacttggcaaattccagaacagtctgaagttg
tattataaaaaccagggaaaagaagcagtgttctttgaatggatatcaatacgtggcacc
catgccaaccttcaggctgtacctgttccatcatccaaagcagctgttcttaaagacatt
tttactttggcagctgaaaagttgggttttgaatttgttacaaaaaaattcagcaataat
tccgaggggagaaaatggttgaggacacagtttgataagaattttagctgcttctatgtg
gaactgcctgaaggttcaatcctattacatttaattgaagagaatgagaagtttcctgcc
caatttggtcgtgaggttgtggctggcctattgaacgtggctgatagggctgattggagg
aattgtacaattggcaaagatgaggaaacaaaactggctgaaaatttcaaaaaacggttt
caagtatttgatccaagtcaatga
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