Gossypium hirsutum (upland cotton): 107887397
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Entry
107887397 CDS
T04793
Name
(RefSeq) homeobox-leucine zipper protein HDG2 isoform X2
KO
K09338
homeobox-leucine zipper protein
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ghi03000
]
107887397
Transcription factors [BR:
ghi03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
107887397
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDF2_C
START
Homeodomain
Homeobox_KN
TUSC1
HTH_Tnp_1
Sas-6_C_CC
Motif
Other DBs
NCBI-GeneID:
107887397
NCBI-ProteinID:
XP_016667113
UniProt:
A0A1U8HT22
LinkDB
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Position
A03:complement(71815916..71821234)
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AA seq
756 aa
AA seq
DB search
MPAGVMIPARNMPSMITGNGSVSGYGTSSGLALGQPNNMMEGQLHPLEMTQNASESEIAR
MRDEEFDSTNKSGSENHELGGSGDDQDPRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDK
QRKELGRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRAEIEKLRADNMRYREALSTA
SCPNCGGPTAVGQMSFDEHHLRLENSRLREEIDRISAIAAKYVGKPVVNFPLLSSPALPR
PFDFGSQPVTEEMYGVGDLLRSISAPSEADKPMIIELAVAAMEELVRMVQMGEPLWMTSL
DGTTCMLNEEEYIRTFPSGIGPKPTGFKCEASKETTVVITNHINLVEILMDVNQWSTVFS
GIISKASTLDVLSTGVAGNYNGALQVMTAEFQVLSPLVPTRESYYVRYCKQHAEGTWAVV
DVSLDTIRPSPTVRCRRRPSGCIIQEMPNGYSKVTWVEHVEVDDGGVHNLYKQLVSSGHA
FGARRWVSTLDRQCERLASLMASNIPTGDVGVITNQDGRKSMLKLAERMVISFCGGVSAS
TAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVSPKRVFDFLRDEHSR
SEWDILSNGGAVQEMAHIANGRDPGNCVSLLRVNSANSSQSNMLILQESCTDPTASFVIY
APVDIVAMNVVLNGGDPDYVALLPSGFAILPDGMTVTDVGMADSGGSSGSLLTVAFQILV
DSVPTAKLSLGSVATVNNLIACTVERIKASLSCDNA
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgccagccggagtaatgatcccggcaagaaacatgccgtcgatgatcaccggaaacggg
agcgttagtggatatggaacatcctcaggacttgcacttggtcagcctaacaacatgatg
gaaggtcaactccaccctcttgagatgacccaaaacgcttctgaaagtgaaattgctcga
atgagagacgaagaattcgacagtacaaacaaatctggtagcgaaaatcatgaattaggt
ggctctggagacgatcaagatcctcgtcccaacaaaaagaagcgttatcatcgccatacc
cagcatcagatccaagaaatggaggcatttttcaaagagtgtccacacccagatgacaag
caaaggaaggagcttgggcgtgagttagggttagaaccgttgcaagtcaaattctggttc
caaaataagcgcacacaaatgaagactcagcatgagcgtcacgaaaacacacagctgcga
gctgagatcgagaagctaagggctgacaacatgcgatatagggaagctttgagcactgct
tcatgcccaaattgtggaggtccaactgctgttggacaaatgtcatttgatgaacatcat
ctcagacttgagaattctcgattaagggaagagattgatcgtatatcagcaatagctgca
aagtacgtgggcaagccagtggtgaactttcctctactttcatctcctgcgcttcctcga
ccatttgatttcggttcacaacctgtcaccgaggagatgtatggtgttggggatcttctc
aggtctattagtgcaccttccgaggccgataagccaatgattattgagcttgcggtggca
gctatggaggaactggttagaatggttcagatgggggaacctttatggatgaccagtctt
gatggtaccacctgtatgctgaatgaagaagagtatattaggacttttcctagcggaatt
gggccaaaacctactggctttaaatgcgaagcttcaaaagaaactactgttgttatcacg
aaccacattaaccttgttgagattctcatggatgtgaaccagtggtcaactgtgttttcg
ggaataatttcgaaggcttcaactttggatgttctctcaacaggagtagcagggaattat
aatggagcccttcaagtgatgacagctgaatttcaagttctttcacctcttgttcccact
cgtgagagttattatgtaagatactgcaaacagcatgcagagggaacttgggctgtagtt
gatgtttctttggatactatacgccccagtcccactgtgagatgcagaagaagaccatct
ggttgcataattcaagaaatgcccaatggctactcgaaggttacatgggttgagcatgta
gaagtggacgatggaggtgttcacaatctgtacaagcaactggtaagctccggccatgct
ttcggagcaagacgatgggtttctactttagatcgacagtgtgagaggcttgcaagttta
atggcttctaacattcccaccggcgatgttggggtgataacaaaccaagatgggagaaag
agtatgctgaagctagctgagcgaatggtaatcagtttctgtggaggagttagtgcctct
acagcacacacgtggacgacattatcgggaactggggctgatgatgtaagggtgatgacc
cgaaagagtgtagatgatccaggtagacctccagggattgtgcttagtgctgcaacgtcg
ttttggctccccgtttcacctaagagggtttttgatttcctcagagatgagcattctcga
agtgagtgggatattctgtctaatggcggagctgtacaagaaatggcacacattgctaat
ggtcgggatccaggcaattgtgtttcactacttagagtaaatagtgcaaattcaagccag
agcaacatgctgattttacaagagagttgcactgatccaacagcctcttttgtgatctat
gctcctgttgatattgttgcgatgaatgttgtcctaaatggaggggatccggactatgtt
gctcttcttccctcgggtttcgcaatactgcctgatggaatgactgtgactgacgtagga
atggctgattccggcgggtctagtggatctcttctaactgttgcatttcagattttggtc
gattctgtgccgacggcaaaactttctctaggatccgttgcaacagtaaacaatttgatt
gcatgcaccgttgaaaggataaaggcatctctgtcatgcgataatgcatga
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