Gossypium hirsutum (upland cotton): 107887462
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Entry
107887462 CDS
T04793
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00040
Pentose and glucuronate interconversions
ghi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
107887462
Enzymes [BR:
ghi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
107887462
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Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
107887462
NCBI-ProteinID:
XP_016667214
UniProt:
A0A1U8HV31
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All DBs
Position
D05:complement(63871363..63873626)
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AA seq
454 aa
AA seq
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MEVTKLRVVFLFSFFTLIPKLWANIAEFDDFWKQREEEAWKIALAAYEPSPENVTCHLNY
HVNKVLEKPMSNQVLEFKDVITNSTRRYLRGKHKKYTGPCMAVNPIDRCWRCKKNWAKNR
KRLAKCVLGFGHKTRGGSKGGYYLVNDNSDDDVVNPKPGTLRHAVIQKRPLWIIFAHDMN
IKLSQELMVQSHKTIDGRGANVHIAYGCGITLQFVHNVIIHNIHIHRVVRSSGGLIRDSE
DHYGFRTVGDGDGISIFGSSKIWLDHISMSECQDGLIDAIQGSTAITISNCHFTHHDHVI
LLGASDTYSKDQFMQVTLAFNHFGKELIQRMPRCRWGYFHVVNNDYTHWKLYAIGGSTHP
TIISQGNRFIAPDDPLTKQITNRNYASESEWRHWVWRSEGDRFMNGAFFVTSGPPSPPRL
KFKKKDIIKPKPAIFVGRLTKFSGTLKCKEGVKC
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggaggtaactaagctaagggttgttttccttttttcttttttcaccctaattccaaag
ttatgggcaaatattgctgaatttgatgatttttggaagcaacgtgaagaagaagcctgg
aagattgctctagcagcttatgaaccgagcccggaaaatgtcacctgtcacctgaactat
catgttaacaaggttcttgaaaaacctatgtccaaccaagtcttagaatttaaggatgtt
attactaatagcacgagaagatacttgaggggtaaacataagaaatacactggtccatgc
atggcggttaatccaattgataggtgttggagatgcaagaagaactgggctaagaatcgc
aaaagactagcaaagtgtgtccttggttttggccacaaaactcgtggagggagtaaggga
ggatactatttggttaacgataattctgatgatgatgtcgtaaaccctaaaccaggaact
ttacgtcatgctgtgattcaaaagaggccattatggataatttttgcccatgatatgaac
attaaattatcacaagagctgatggttcaaagccataagacaattgatggtcgtggagca
aatgttcatatagcatatggatgtggcattacacttcaatttgtgcacaatgtcataatt
cataatattcacattcatcgcgttgttagaagtagtggtggcctaattagggactctgaa
gatcattatggttttcgcacagtcggcgatggagatgggatttccatatttggatcatca
aagatttggcttgatcatatttccatgtctgagtgtcaagacggactcatcgatgcaata
caaggttccactgccatcaccatctcaaattgccatttcacccatcatgatcatgtgatc
ttgttaggtgcaagtgatacctattctaaagatcaatttatgcaagtcacacttgcattc
aaccattttggcaaggaattgatacaaagaatgcctagatgcagatggggatactttcat
gtcgtcaacaatgactacactcattggaaattgtatgccattggtggtagcacacatccc
accattattagccaaggcaataggttcatagctccagatgaccccctaactaaacagata
accaataggaactatgcatcagagtctgaatggaggcattgggtatggagatcagaagga
gaccggttcatgaatggagcattttttgtaacatctgggccaccctcaccaccccgactg
aaattcaaaaagaaagatataattaaacctaagcctgcaatatttgttggaagactcact
aaattttctgggactcttaaatgtaaggaaggagttaagtgctag
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