Gossypium hirsutum (upland cotton): 107887743
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Entry
107887743 CDS
T04793
Name
(RefSeq) RNA-binding protein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107887743
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107887743
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
107887743
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_PARP14_3
RRM_7
Nup35_RRM_2
RRM_Nup35
RRM_3
RRM_occluded
Lipoprotein_18
RRM_5
Gp6_C-I
Motif
Other DBs
NCBI-GeneID:
107887743
NCBI-ProteinID:
XP_040956945
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Position
A03:complement(106568572..106569730)
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AA seq
195 aa
AA seq
DB search
MEFTNPKLVINGISTEMNEMILRRHFSAYGEVKHVVVYAKKSIAFVTFVDPSKAQISLQQ
QHIILGRKVKVRPAKPKVEIGKRKIFVGGLPRSITDEEFKGYFEKFGSIVDAVVIHDKET
KRSRGFGFVTYEAEESANLVLRTNFHLLNNKRVEVKKVTPRKEMVPTGFGFPPYYYDPYY
QTYFYVFWVPIPRFY
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atggagtttacaaatcctaagttagtcataaatggaatttctactgagatgaatgaaatg
atattgagacgacacttcagtgcgtatggtgaagttaaacatgttgttgtctacgctaaa
aaatccatagctttcgttacttttgttgatccttcaaaggctcaaatttcccttcaacaa
caacatattattctcggtcgaaaagtgaaggtaagaccagcaaaaccaaaagtagaaata
gggaagaggaagatatttgtgggaggattgcctcgatccataacagatgaagaattcaaa
ggatatttcgagaaatttggaagcatagttgatgcagtggtaatacatgacaaagaaact
aagagaagcagagggtttgggtttgtgacatatgaagcagaggagtcagccaaccttgtt
ttgcgaactaatttccatctattaaacaacaagagagttgaagtgaagaaggttactcct
aggaaagagatggtgccaaccggatttgggtttcctccttattattacgatccatattat
caaacatatttttacgtcttttgggtgcccattcctcgattttactga
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