Gossypium hirsutum (upland cotton): 107888003
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Entry
107888003 CDS
T04793
Name
(RefSeq) RHOMBOID-like protein 1
KO
K27605
rhomboid-like protein, plant [EC:
3.4.21.105
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ghi01002
]
107888003
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
107888003
Peptidases and inhibitors [BR:
ghi01002
]
Serine peptidases
Family S54: Rhomboid family
107888003
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Gene cluster
GFIT
Motif
Pfam:
Rhomboid
CcmH
Motif
Other DBs
NCBI-GeneID:
107888003
NCBI-ProteinID:
XP_040963851
UniProt:
A0ABM3B9Y1
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Position
A03:complement(8869650..8873272)
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AA seq
416 aa
AA seq
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MDSKIEIKVTNPKNGDKVVHSVRPGRATSPSPSSQPSQSSDGRRRRQGQGYGHGEGEGQR
NRGTEGQQAGRLIDFMPFKKWVPWMIPGFVLVNIFLFMITMYINNCPKNSKKCVGSFLGR
FSFQPFKENPLLGPSSSTLEKMGALEVSKVVKSRQAWRMISCMWLHAGVFHILANMLSLL
FIGIRLEQEFGFVRIGMLYLIAGFGGSILSSLFIQTGISVGASGALFGLLGSMLSELITN
WTIYSNKFAALLTLVLVIVINLAMGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGYVNQ
KKVPPGYIAPSRKPKHKTYQYVLWVCSLILLIAGFAIGLILLLRGVNLNEHCSWCHYMSC
IPTPLWSCKNRQVYCQSTEFGKSLNLTCISNGKSEIYPLTEESTSQVQQLCSKLCG
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggattccaagattgaaatcaaggtgaccaatccaaagaacggagataaggtagtgcat
tcggtgagaccaggtcgtgccacgtcaccgtcaccatcgtcacagccatctcagtcgtct
gacgggcggcgtaggcggcagggacaagggtacgggcatggagagggagaggggcaaagg
aacaggggcacggaagggcagcaagcagggcggttgattgatttcatgccgtttaaaaaa
tgggtgccttggatgattccaggctttgttttggttaatattttccttttcatgataaca
atgtacattaataattgtcccaagaactcgaagaaatgtgtggggagcttcctgggcagg
ttctcgtttcagcctttcaaagagaatcccctacttggcccttcttcttctacattagag
aaaatgggtgctcttgaagtgtctaaagttgtcaaaagtcgtcaagcatggcgcatgatt
tcttgtatgtggttgcatgctggtgttttccacatacttgcaaacatgttgagtctttta
ttcattggaattcggctcgagcaggaattcgggtttgtgagaatcgggatgctttatctg
atcgctggtttcggtgggagtatactgtcatctctttttattcagaccggtatatcggtt
ggtgcctctggtgcactttttggtttactaggaagcatgctttcagaactaatcacaaac
tggacaatatattcaaataagtttgcagcgttgttaactcttgttttggttatcgtaata
aatctagctatgggaatcctcccacacgtggataactttgctcacatcggaggatttatc
tccggcttcctcctcggtttcgtgttcctaatccgtccccagtttggatatgttaatcag
aaaaaggttcctccaggatacattgcaccttctcgtaaacctaaacataagacataccag
tacgtcttgtgggtctgttctctgatactattgattgcaggattcgccattggcctaata
cttctccttcgaggggttaacttgaatgaacactgttcttggtgtcattatatgagttgt
atcccgacgccattgtggagctgcaaaaaccgacaagtgtattgtcagtcgaccgagttc
gggaaatcgttgaacttgacatgcataagcaatgggaaaagcgaaatctatccgttaaca
gaggaaagcacttcccaagttcaacagctatgttctaagctctgtggttga
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