Gossypium hirsutum (upland cotton): 107888173
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Entry
107888173 CDS
T04793
Name
(RefSeq) 26S rRNA (cytosine-C(5))-methyltransferase NOP2B
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ghi03009
]
107888173
Enzymes [BR:
ghi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
107888173
Ribosome biogenesis [BR:
ghi03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
107888173
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
RsmF-B_ferredox
Methyltransf_31
FtsJ
Motif
Other DBs
NCBI-GeneID:
107888173
NCBI-ProteinID:
XP_016667788
UniProt:
A0A1U8HV11
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All DBs
Position
A01:complement(14408062..14413414)
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AA seq
641 aa
AA seq
DB search
MAANKNKGAKSKNPPPKEKQRNHLFTEKKRPTKKDEVFDDVSDGQSEEEQLEEAEDLLDG
DEQVSDFDDASDISDDDDAPLADDFLQGSDDEDEDRASGSASGSGSDSDGTDIEEKSRAI
DEQREREEADAQAEMQLNIKEESDEFRLPTKEELEAEQQRPPDLANLQTRIKDIVRVLSN
FKELRQEGNTRKDYVDQLKMDLRSYYGYNEFLIGVLVDMFPVVELMELIEAFEKPRPTCI
RANTLKTRRRDLADTLSKRGVELDQLSKWSKVGLVVYNSHVPIGATPEYLAGFYYIQGAS
SFLPVMALAPQEKERVVDMAAAPGGKTTYVAALMKNSGLIFANEMKETRLKSLTANLHRM
GVTNTIVCNYDGRELPKVLGQNSVDRVLLDAPCSGTGVITKDPSVKTSKSLDDIQKCAHL
QKQLILAAIDMVDANSKTGRYIVYSTCSMMVPENEAVIDYALKKRDVKVVPCGLDFGCPG
YIRFREHRFHTSLENTRRFYPHVHNMDGFFVAKLKKMSNSKKNLVSSDGSETVEQTQRPE
EIHSDEDNKKELEQQKMKKQIPKGKKKSLKAKGLSGNGKVESPPTLKNRDRSENGKVELA
ATSKKRKRKFPSKEEISKAREEKRKAMRGKKKQPKGDKSGI
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaataagaacaaaggagcaaaatcgaagaacccgcctccaaaagagaagcaa
agaaaccatcttttcactgagaaaaaacgacccaccaaaaaagatgaggtctttgatgat
gtttctgatggccagagcgaagaagaacaattagaagaagcagaagacttattggatggg
gatgaacaagtgtctgattttgatgatgcctctgatatttcagatgatgatgatgctccc
ttggctgatgatttccttcaaggaagtgatgacgaagatgaagacagagcttcaggttct
gcatcaggttctggttccgattcagatggaactgatattgaggagaagtcaagggctatt
gatgaacaaagggagagggaagaagcagatgcacaagcagaaatgcagttgaacattaaa
gaagagtctgatgagtttagattgccaacaaaagaggaactggaagcagagcaacaacgt
ccacctgatcttgcaaatcttcagacgagaataaaagatattgttcgagtgctctcaaat
tttaaggagttgaggcaagagggaaacacaaggaaggattatgttgaccaacttaaaatg
gatttgcgttcatactatggctacaatgaattcctcataggggttttggtggatatgttt
ccagttgtggaactcatggaacttattgaagcttttgaaaagcctcgacctacatgtatc
agggcaaacactttaaagactcgcaggagggatctagctgatactctctccaaaagaggg
gtagaactagaccaattaagcaagtggtcaaaagtcggattggtggtgtataattcacat
gtgcctattggagccactccagagtatttggctggcttttactatatacaaggtgcaagc
tcctttttgcctgttatggctcttgctcctcaggaaaaggaacgagtagttgatatggca
gctgcacctggtggtaaaacaacctatgttgccgctctcatgaaaaatagtgggttaatt
tttgcaaatgaaatgaaggaaacaaggctgaagtcacttactgcaaatttgcatcgtatg
ggagtgacaaacacaatagtttgtaactatgatgggagggagcttcccaaggttttgggt
cagaattcggttgatagagtgttgttggatgccccttgtagtggtacaggagttataacc
aaagatccatccgttaaaacctctaaaagtttagatgacatacaaaaatgtgcccatttg
cagaagcaattgatacttgctgctattgatatggttgatgcaaattccaaaactggcaga
tacatcgtttactcaacatgctccatgatggttccagagaatgaagctgtcattgactat
gcactcaagaagagagatgtcaaagtagttccatgtggactcgactttgggtgtccagga
tatatccgatttagggagcatcggtttcatacatccttagaaaacacaaggcggttttat
cctcatgtacataatatggacggtttttttgtggcaaagttgaagaaaatgagcaattca
aagaagaatcttgtaagttctgatggttcagaaacagtagagcaaacccagaggccagag
gagatccatagtgatgaggacaacaaaaaagagcttgaacaacaaaagatgaagaaacaa
atcccgaaagggaaaaagaagagcttaaaggcgaaagggttatctggaaacggaaaggtt
gaatcaccaccaacattgaaaaaccgggacagaagcgaaaatgggaaggtagaattggca
gcgacatcgaaaaagaggaaaagaaaatttccttctaaagaggaaatctcaaaagcaagg
gaagagaagagaaaggcaatgagggggaaaaagaagcaaccaaagggagacaagagtgga
atatga
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