Gossypium hirsutum (upland cotton): 107888290
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Entry
107888290 CDS
T04793
Name
(RefSeq) LOW QUALITY PROTEIN: protein HASTY 1
KO
K14289
exportin-5
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107888290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ghi03016
]
107888290
03036 Chromosome and associated proteins [BR:
ghi03036
]
107888290
Transfer RNA biogenesis [BR:
ghi03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
107888290
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
107888290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exportin-5
Xpo1
Motif
Other DBs
NCBI-GeneID:
107888290
NCBI-ProteinID:
XP_016667842
UniProt:
A0A1U8HP82
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Position
D13:57704706..57713107
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AA seq
1206 aa
AA seq
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MEESNSNNSTVNNVARAIVAALDWNSTPDARKAAVSYLESIKAGDIRVLANTSFLLVKKD
WSSEIRLHAFKMLQHLVRLRWEEFSLSERRNFSNVAVELMSEIADPCEEWALKSQTAALV
AEVVRREGLNLWQELFPSLVSLSSKGPVQAELVSMMLRWLPEDITVHNEDLEGDRRRLLL
RGLTQSLPEILPLLYTLLERHFGEALSEVGRQHLDIAKQHAAAVTATLNAINAYAEWAPL
SDLAKFGIIHGCGFLLSSPDFRLHACEFFKLVSPRKRPADDFASEFDSAMSSIFQILMNV
SREFLVRSNSAGGAIDESDFEFAEYVCESMVSLGSSNLQCILRDSSTSALYLQQMLGFFQ
HFKLALHYQSLQFWLALMRDLMSKPKLSVHSSGEGSAASNTDSNSAQVDNEKRKILSFLN
DDICSTILDISFQRMLKKERLITGKALSLGALELWSDDFEGKGDFGQYRSRLFELIKFIA
SNKPLVAGAKVSERIIMIIKNLLNSPMPAEDLAVMESMQVALESVVSSIFDGSNEFAGGS
SEVHVALCGIFEGLLRELLSLNWTEPALVEVLGHYLDAMGPFLKYFSDVVGSVINKLFEL
LNSLPFVVKDPSTSSARHARLQICTSFIRIAKAADKSILPHMKGIADTMVYLQREGRLLR
GEHNLLGEAFLVIASAAGVQQQQEVLAWLLEPLSQQWIQIEWQNNYLSEPLGLVRLCSET
AFMWSLFHTITFFEKALKRSGMRKGQSSSTSSSTPHPMASHLSWMLPPLLKLLRAIHSLW
SPSVFQVLPXEIKAAMSMSDVERSSLLGVGNPKLSKGXLTFIEGSPFDVNKEGYTEPNEA
DIRNWLKGIRDSGYNVLGLSATIGDPFFKGIDVDSVALALIENIQSMEFRHTRQLVHSVL
IPLVKSCPPDMWGVWLEKLLHPLFVHCQQALSCSWFGLLHEGRAKVPDNHGILTGSDLKV
EVMEEKLLRDLTREICLLLSTIASPGLNTSLPALEHSGHVGRVDMSSLKDLDAFAPSSMV
GFLLKHKSLAIPVLQISLEAFTWTDSEAVTKVCSFSASVVLLAILTNNVDLREFVSRDLF
SALIRGLALESNAFISADLVNLCREIFIYLCDRDPAPRQILLSLPCITPNDLHAFEEALT
KTASPKEQKQHMRSLLLLATGNNLKALAAQKNVNIITNVTARPRGPVNAPGNGIEEGDSV
GLAAIL
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaagtaacagtaacaatagcacagtaaacaatgtggctagagccatcgttgca
gcccttgattggaactctactcctgatgctcgcaaagctgccgtttcttaccttgaatct
attaaagcaggagatatacgggttttggcaaacacatcattcttattagttaaaaaggat
tggtcttcagaaatacgattacatgcatttaaaatgctacagcacttggttcgattgcgg
tgggaggaattcagtctctcagaacgtaggaacttttcaaacgttgctgttgagttaatg
tctgaaattgcagatccttgtgaggaatgggctttgaaaagtcaaacggctgccctagtt
gctgaggtagttagaagagaaggactaaatctttggcaagagctgtttccatcgctagtt
tccctatccagcaagggccctgttcaagctgagttggtctcaatgatgctgagatggctt
cctgaagatattacagtccacaatgaagatttggaaggtgatcggcgtagattactgtta
cgtgggcttactcaatctttgccagaaattttgccactactatacacattattggaaagg
catttcggggaagcattgagtgaggtgggtagacaacatcttgacatagcaaaacagcat
gcggctgctgtaacagctactttaaatgccataaatgcctatgccgaatgggcacctttg
tctgatcttgctaaattcggcatcattcatgggtgtggtttcctactttcttctcctgat
tttcgccttcatgcttgtgagtttttcaaactagtctctccaagaaagagacctgctgac
gactttgcttctgaatttgattctgcaatgagtagcatctttcaaatcttgatgaatgta
tctcgggaattcttggtcagatctaactcagcaggtggggcaatagatgaaagtgacttt
gagtttgcagaatatgtttgtgaaagtatggtatctttgggttcctcaaacttgcaatgt
attctcagagacagcagtacgtccgctctctacttacagcagatgcttgggttctttcaa
cattttaagctagctcttcattatcaatccctgcaattttggttggcactgatgcgggat
ttgatgtcaaagccgaagctttcagtgcattcatctggagaagggtcagctgctagcaat
acagactcaaattcagctcaggttgacaatgaaaagagaaagattttaagttttctcaat
gatgatatttgtagtacgattctggatatatcattccaacgcatgcttaagaaagaaagg
cttatcactggaaaagccctttctctaggggctttggagttgtggagtgatgactttgaa
ggaaagggtgatttcggccagtaccgttctagacttttcgagttaatcaagtttattgct
tcaaacaagccccttgtggctggtgctaaagtttccgaaagaattattatgatcattaag
aacctcttgaactctccaatgcctgctgaggacttagcagtgatggaaagcatgcaagta
gctctggaaagtgttgttagctctatttttgatggttcaaatgagtttgcggggggtagt
tcagaagttcacgttgctttatgtggaatatttgaaggtttacttcgggaacttctttca
ttgaattggactgagcctgcccttgtggaagtacttgggcactatctagatgcaatgggt
cccttcctgaagtatttctcggatgtagttggtagtgtcatcaataagctatttgagctc
ctaaattcacttccttttgttgttaaggatccttcgacgagcagtgcacggcatgcaagg
ttgcaaatttgtacatcatttattcggatagccaaagctgctgacaaaagtattctgcct
cacatgaagggtattgctgataccatggtgtatttgcaaagagaaggccgtctgcttcgc
ggtgaacataatcttctaggtgaagcatttcttgttatagcatctgctgcaggggttcaa
cagcagcaagaagttttggcatggttacttgaacccttgagccaacaatggatacaaata
gaatggcaaaacaattacttgtccgaacctcttggactagttcgtttatgctccgagaca
gcatttatgtggtcactgttccacactatcacattctttgagaaagcactcaagaggagt
ggaatgaggaaaggccaaagcagctcaacatcaagttctaccccacatccaatggcttct
catctgtcttggatgcttcctcccctcttaaaactgcttcgtgctatacattccctttgg
tcaccatcagtattccaagtattacctngggagattaaagcagcaatgagcatgagtgat
gtggagcggtctagtcttcttggcgttgggaaccccaaattgtcaaaggggncattaact
ttcatagagggatctccatttgatgtgaataaggaagggtatactgaaccaaatgaagct
gatatacggaattggttaaagggtatcagagacagtgggtacaatgtattgggactatct
gcaaccattggagatccgtttttcaaaggcattgatgttgattctgttgctttagctcta
attgagaatatacagtcaatggagttcagacatacaaggcagcttgttcattctgttttg
attcctttggttaagtcttgtcctcccgacatgtggggggtatggctggaaaagctactg
cacccgttatttgtccactgtcagcaagctctgagctgttcatggtttggtcttctgcat
gaaggccgggcgaaggttcccgataatcatggtatccttactgggtcagacttgaaagtg
gaagtaatggaagagaagttactccgagatttaactcgtgagatatgtttgctcctttct
actatagcgtcacctggattaaacactagccttcctgctttagaacattcggggcatgtt
ggtcgcgtggacatgtcttctcttaaagatttggatgcatttgcaccaagctctatggtt
ggtttccttttgaagcacaaaagcctggcaattccagtactccaaatatcgttagaagca
tttacttggacagacagtgaagctgtgaccaaagtttgttctttctctgcttctgtggtt
cttctagctatacttacgaacaatgtcgatctccgggaatttgtttcgagagatctattt
tctgctctcatccgaggtctagccctcgagtcaaatgcttttatcagcgctgatctggtt
aacctctgtcgcgaaatattcatttatctctgtgacagagatccggctcccagacagatt
ttactttccctcccttgtattaccccaaacgatttacatgcctttgaagaagccttgaca
aagaccgcaagtccgaaagaacaaaagcagcatatgagaagcttgcttttattagctact
gggaacaacctaaaagctcttgctgctcagaaaaatgtaaacattattacaaacgttact
gcgcggccacgtggtccagtcaatgctccaggaaatggaatcgaggagggcgacagcgtg
ggcttggcagctatactgtga
DBGET
integrated database retrieval system
