Gossypium hirsutum (upland cotton): 107888336
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Entry
107888336 CDS
T04793
Name
(RefSeq) vacuolar protein sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
107888336
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107888336
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ghi04147
]
107888336
Membrane trafficking [BR:
ghi04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
107888336
Exosome [BR:
ghi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
107888336
Exosomal proteins of colorectal cancer cells
107888336
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
PH_TFIIH
Rrn6_beta-prop
Motif
Other DBs
NCBI-GeneID:
107888336
NCBI-ProteinID:
XP_040965216
UniProt:
A0A1U8HPD4
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Position
D13:58213752..58220089
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AA seq
456 aa
AA seq
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MSNFFSKAEVTSSGRPVLLRNEVECHLLSAVDLEPEDHRHFSLLKSGLLILTTHRLIWLP
SSSASTPTSASAIPLAAISHIFSSKKSLKSVFHSPRIRFQVLVSSDGRVFDPGSESGSSS
GSGSRSVVVTAVIRGKGDCDGFLVKFWDSWRARSWEATETSDSGSASASGSGAATGTGGG
LYSSDGSVRMVGVAGILRKEQEMWESTDKSLQDAFQDLNALMSKAKEMVMLAEKMRQKLL
SGTSSQTSGTNDEDMGSKEEMQDWLLSVGIISPVTKESAGALYHQQLSRQLADFVRIPLE
RAGGMINLIDAYCLFNRARGTELISPDDMLQACSLWEKFDVPVMLRKFDSGVMVIQNKSH
SDEEVFARIKSLVTKPEALLTGISPTDAAMTLGIAPAMAKEHLLTAEIKGLLCRDISPDG
FRFYINLFPEIDPCNMYFVKNYGICSTWIKAVSTTG
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgtccaactttttctccaaggcggaggtgacaagcagcggccgccctgtcctcctacgc
aacgaagtcgaatgccaccttctctccgccgtcgacctcgaacctgaagaccaccgtcac
ttctccctcttaaaatcgggtctcctcatcctcaccacccaccgcctcatctggctacct
tcttcgtccgcctccacccctacttccgcctcagccatccctcttgctgccatttcccac
atcttctcttccaaaaaatctctaaagtcagtcttccactcccctaggatccgcttccaa
gtcctcgtctcgtccgatggtcgggtcttcgatccaggatccgagtctggttccagttca
ggttcgggctcgagatcagtcgtagtcacggcagtgattagagggaagggggactgtgat
gggtttttggtgaagttttgggacagttggcgggcgagatcttgggaggctactgagact
tcagattccggctcagcttcggcttcgggttcaggggcagccacaggaaccggtggaggg
ttgtactcgagtgatgggtcggtgaggatggttggggtggcgggtattttaaggaaggag
caagaaatgtgggagagtactgataagagtttgcaggatgcttttcaggacttaaatgct
ctcatgagtaaagctaaagagatggtgatgctagcagaaaaaatgagacaaaagcttttg
tccggaacgagttctcaaacaagtggaacaaatgatgaggatatgggttcaaaggaagag
atgcaagattggttgttgagtgttggcataatatccccagtcactaaagagtctgcaggt
gccctgtaccatcaacaattgtcccgtcagctggcagattttgtgagaattccactggag
agagcaggtggaatgatcaaccttatagatgcctattgtctcttcaatcgtgctcgtggc
acagaattgatctctccagatgatatgttgcaagcgtgttctttgtgggagaaatttgat
gttccagtgatgcttaggaagtttgatagcggagttatggtgatccaaaacaagtcccat
agtgatgaggaggtttttgctagaatcaaaagccttgtgactaagcctgaagcgcttcta
actggtataagcccaactgatgctgcaatgacattagggattgctccggccatggccaag
gagcatcttctaactgcagagatcaaaggtttgctatgcagggatataagccccgatggc
tttcggttttatattaacctgtttcctgaaattgacccatgtaatatgtattttgtgaag
aattatgggatctgcagtacttggatcaaagcagtttctactaccggttga
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