Gossypium hirsutum (upland cotton): 107888368
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Entry
107888368 CDS
T04793
Name
(RefSeq) YTH domain-containing protein ECT3 isoform X1
KO
K20102
YTH domain-containing family protein
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107888368
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107888368
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
Glyco_hydro_75
Sbi-IV
Allexi_40kDa
Motif
Other DBs
NCBI-GeneID:
107888368
NCBI-ProteinID:
XP_016667945
UniProt:
A0A1U8HPH3
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Position
A11:complement(110395720..110400040)
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AA seq
621 aa
AA seq
DB search
MATADSILANFTPLEVADSLENLSMDSQAKTTKVPEPVKKDFYSDNGSYMYQQAYGYMPY
GAYSVPSSSLPLMGHDGQLHALQEYYYPSTYYQPPQQTSQTDASQVVVSTVNADDQASLS
TETNTGNLSTVESGAGLSGNTGSGSQKSTFKVSSLNPNASYKRESFPTGKSEGHQNSRFS
YEGVQPTIPWIDMSVSSNGQSKHTANNGFSSYAKNLSSGRNGNLHPFPHFMHLHNARPSS
GVAQAFGYMNHIYPNNMTYGHYGNTNGGGSGSGFGSYGCSAWKKGQGCYNVGNNNKSRGL
GYGKENMDGLNELNKGPRVKGSNNKDGFGTATLAVKDQNLPLTESNKENSVSLVPDLGQY
NKEDFPDSYSNAKFFVIKSYSEDDVHKSVKYNVWASTSNGNKKLDAAFGEAKEKPDGCPV
FLLFSVNTSGQFVGVAEMVDQVDFNKTLEYWQQDKWTGCFPVKWHIIKDVPNTLLRHITL
ENNENKPVTNSRDTQEVNFEQGIQILKIFKDHSSKTCILDDFEFYEARQKTIQEKKAKHQ
LLQEKVLSGEPNDAVMEKKENVAIANNALEKSVESASIKEPTVASTTEVVKANVDVKPVQ
ENGSVTATEDGPNSVCVASAC
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgccgatagtatccttgctaattttacacctctggaagttgcagattcactg
gagaatttgtctatggattcacaagccaagaccacaaaagttcccgagcctgttaagaag
gatttttacagtgataatggctcttacatgtaccagcaagcttatggttatatgccatat
ggggcatattccgtgcccagttcatctcttccacttatgggacatgatggccagctgcat
gcactgcaagaatactattatccaagtacttattaccaaccacctcagcaaactagtcaa
acagatgcttctcaagtggtggtttcaactgtcaatgcagatgatcaagcttctttatca
actgaaacaaatacaggaaatttgagcactgtagaaagtggtgcgggtttgagtggtaat
actggttctgggtcacaaaaatcaactttcaaggtctcctctctaaatccgaatgcttcc
tataaaagagaaagctttccaacaggtaaatccgaaggtcatcagaattcaagatttagc
tacgaaggggtccagccaacaattccttggatagatatgtcagtgtcttctaatgggcaa
tccaagcataccgctaataatggattctcttcatatgcaaaaaacctttcatctggcaga
aatgggaatcttcatccctttcctcatttcatgcatttgcacaatgcaagaccatcatca
ggtgtagcccaagcatttggatacatgaatcacatttaccctaacaacatgacctatggc
cattatggaaacaccaatggagggggttctggttctggttttggatcatatggctgctct
gcctggaagaaagggcaagggtgctataatgttggtaacaacaacaaatctaggggtctt
ggttatggaaaagagaatatggatggtttaaatgagctgaacaaaggacccagagtaaaa
gggagtaacaacaaggatggttttggaactgcaacactagctgttaaagatcagaacctt
ccattgactgagagcaataaggagaacagtgtttctcttgttccagatctgggacagtac
aacaaagaggattttcctgatagttattcaaacgccaagttttttgttattaaatcatat
agtgaggatgatgtccacaaaagtgtcaaatacaatgtgtgggccagtacatctaatggc
aacaagaagcttgatgcagcattcggtgaggccaaggagaagcctgatggctgtcctgta
tttctattgttctcggttaataccagtggtcaatttgttggggtagcagagatggtcgac
caagttgattttaacaagactctagagtactggcaacaggacaagtggactggttgcttc
cctgtgaagtggcacatcattaaggacgtgccaaacactttgctgaggcacataacactt
gagaacaatgagaacaagcctgtcactaatagtagggacacccaagaggttaattttgag
caggggatccaaattcttaaaatttttaaagatcattccagtaagacgtgcattcttgat
gattttgaattttatgaagctcgtcagaagacaatccaagagaaaaaggctaagcatcag
ctgttacaagaaaaggttttgagtggagagcctaatgatgctgtaatggagaagaaagaa
aatgtggcaatagcaaataacgctttggaaaagtctgtggagtcagcgtcgataaaagaa
ccaactgttgcatcaacaacagaagtagtaaaggctaatgtcgatgtgaaacctgtacaa
gagaatggatcagttacagcaactgaagatggccccaactcagtttgtgttgcgagtgct
tgctaa
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