Gossypium hirsutum (upland cotton): 107888382
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Entry
107888382 CDS
T04793
Name
(RefSeq) serine/arginine-rich splicing factor RSZ22-like
KO
K12896
serine/arginine-rich splicing factor 7
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107888382
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ghi03041
]
107888382
Spliceosome [BR:
ghi03041
]
Common components
Common spliceosomal components
SR proteins
107888382
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
RRM_7
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
107888382
NCBI-ProteinID:
XP_016667966
UniProt:
A0A1U8HPN1
LinkDB
All DBs
Position
D13:58939108..58941299
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AA seq
186 aa
AA seq
DB search
MSRVYVGNLDPRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDHRDAEDAIRELDG
KNGWRVELSHNSRGRGGRGGGGGGGGGGRGRSGGSDLKCYECGEPGHFARECRTRGGSGR
RRSRSPRYRRSPSYGRRSYSPRGRSPRRRSLSPRGRNYSKSPQYRGREEVPYANGNGVRD
RHRSRS
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgcgtgtacgtgggtaacctagacccacgagtttcggagcgggatcttgaagat
gagtttcgtgtctttggagttattcggagtgtatgggttgctcggaggcctccaggttat
gctttcattgactttgatgatcacagagatgctgaggatgccattcgtgaattagatggc
aagaatggctggagagttgagctttctcataactctagaggcagaggtggacgtggaggc
ggaggtggtggtggtggtggtggtcgtggacggtctggtggttctgatttgaagtgctat
gaatgtggtgagcctggtcattttgctcgggaatgccgcacacgtggtggttctggaaga
cgtcgcagccgcagccctagatatcgtaggagcccaagctatggtcgcagaagctacagt
cctcgtggacggtccccaaggcgccgcagtctctctccacgtgggcgtaactacagcaag
tctccccaataccgtggtcgtgaggaagtgccatatgctaatggaaatggtgtaagggac
cgccatcgcagcaggagctaa
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