Gossypium hirsutum (upland cotton): 107888412
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Entry
107888412 CDS
T04793
Name
(RefSeq) EIN3-binding F-box protein 1-like
KO
K14515
EIN3-binding F-box protein
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04016
MAPK signaling pathway - plant
ghi04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
107888412
04075 Plant hormone signal transduction
107888412
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107888412
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
107888412
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
LRR_At5g56370
F-box-like
F-box
LRR_RPS2
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
107888412
NCBI-ProteinID:
XP_016668005
UniProt:
A0A1U8HPM9
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Position
D13:complement(59249358..59253275)
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AA seq
639 aa
AA seq
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MSKLFSFSGSDNFFPGGSIYPNPKESSLFFSLGHHVDVYFPHHKRSRISPPIVFSGERVE
KKNPSIEILPDECLFEIFRWLPGGQERSSCACVSKRWLTLVSNIHRDEINDNNKGGVVSK
VEDQDVEGDGYLSRVLEGKKATDVRLAAIAVGTASRGGLGKLSIRGSNSTCGVTNVGLRA
ISRGCPSLRVLSLWDSSSVGDEGLFEIADGCHQLEKLDLCLCPAITDKSLLAVAKGCPNL
KDLTIEGCANIENEGLQALARCCPNLKAISIKDCPLIGDQGIASMLSSASFTLTKIKLQA
LNITDVSLAVIGHYGKAVTDLSLISLPNVSEKGFWVMGNGHGLQKLKSFAVTSCRGVTDL
GLEVVGKGCPNLKQLCLHKCAFLSDKGLVSFAKTASSLESLQLEECHRITQFGFFGSLLN
CGAKLKAISLVNCYGIKDLNLGLPSVLPCKSLRSLSIRNCPGFGDASLAALGKLCPQLQH
VELSGLHGISDAGFLPLLETREADLVKVNLSGCVNLSDKAVCIMADLHGWTLEMLNLEGC
KISDASLVAIAKNCQLLSDLDVSKCAITDSGIAALARSNQIKLQILSMSGCSKVSDKSMP
SLRKLGQTLLGLNLQQCKAISSSTVDLLVEQLWRCDILF
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagctattttcttttagtggaagtgataattttttccctggggggtcaatttac
ccaaaccccaaggagtcaagtctctttttctcccttggacatcatgtggatgtatatttt
cctcatcacaagaggtcccgcatcagtccccccattgttttctctggagaaagggttgag
aagaagaacccatcaattgagattctccctgatgaatgcttatttgaaatcttcagatgg
ttacctggaggccaagagaggagttcctgcgcttgtgtttccaagcgctggcttacgctt
gtaagcaacatccacagagatgaaatcaatgataacaacaagggtggagttgtttctaag
gttgaagatcaagatgttgagggtgatggatacctctctagggttttggaagggaagaaa
gcaacagatgttagacttgctgctattgctgtaggaactgcaagccgtggaggattgggt
aagctttctattagaggaagcaattccacatgtggagtgactaacgttgggctcagggcc
atttcccgtgggtgcccttctctaagggttctttcattgtgggattcgtcttctgttgga
gatgaaggtctgtttgagattgctgatgggtgtcaccagctagagaagcttgacctttgc
ctctgccctgcaattactgataagtctttgcttgctgttgctaagggctgtcctaatttg
aaggatctgaccattgagggttgtgcaaacattgaaaatgaaggcctccaagctcttgct
cgctgctgtccgaatctaaaggctatttcgatcaaagactgcccccttataggagatcaa
ggaattgcgagcatgttgtcttcagcctcatttaccctcacaaaaataaagctccaggcc
ttgaatatcaccgatgtctctcttgctgttataggacactatggcaaggcagtgactgat
ctttctctcattagtcttccaaatgtgagtgaaaagggcttctgggtaatgggtaatggt
catgggctacagaaattgaaatcttttgcagttacatcctgccgtggtgtaacggacttg
ggacttgaagttgtcggaaagggttgcccaaatttgaaacagttatgcctccataaatgt
gctttcttatctgataaagggttggtgtcttttgccaaaacagctagttcactagagagc
ttgcaacttgaggagtgccacaggatcacccaatttgggtttttcggttcccttcttaac
tgtggtgcaaagttgaaggctatttctctcgtgaactgctatggtataaaggacctaaac
ctgggattgccttctgtattgccttgcaaatcccttcgatcactgtccatccgtaactgc
cctggttttggtgatgccagcttggctgcattagggaagttgtgccctcagttgcagcat
gtagagttgagcgggcttcatgggatatcagacgctgggtttcttccattgcttgagact
cgtgaggcagatttggtgaaggttaatctcagcggttgtgttaatttaagtgacaaagct
gtctgtatcatggctgatttgcatgggtggactctagaaatgctgaatcttgaaggttgt
aagatcagtgatgctagtttggttgcaattgcaaagaactgtcagttactcagtgatctt
gatgtctccaaatgtgcaatcactgattctggaattgcagctctggctcgttctaatcag
atcaaactgcagatcctttctatgtctggttgctctaaggtctctgacaaaagcatgcct
tcacttcgaaaactgggtcagaccctgttggggttaaacctacaacaatgcaaggcaatc
agcagcagcacagttgacctactcgttgagcagctctggaggtgtgatatccttttctga
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