Gossypium hirsutum (upland cotton): 107888470
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Entry
107888470 CDS
T04793
Name
(RefSeq) LOW QUALITY PROTEIN: auxin response factor 6
KO
K14486
auxin response factor
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
107888470
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GFIT
Motif
Pfam:
Auxin_resp
B3
AUX_IAA
SIS_2
Motif
Other DBs
NCBI-GeneID:
107888470
NCBI-ProteinID:
XP_016668079
UniProt:
A0A1U8HXH9
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Position
A09:complement(1918551..1926225)
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AA seq
904 aa
AA seq
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MRLSSSGLNQQTQEGEKKCLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKE
VDAHIPNYPSLXPQLICQLHNVTMHADVETDEVYAQMTLQPLSPQEQKDVYLLPAELGAP
SKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYTQQPPAQELIARDLHDNEWKF
RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRANRPQTVMPSSV
LSSDSMHIGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAISHTRISVGMRFR
MLFETEESSVRRYMGTITGISYLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEVEPL
TTFPMYPSPFPLRLKRPWPSALPSFHAFKDGDMSINSQLMWLQGGVGDQGLQSLNFQGFG
VAPWMQPRLDTSSIPGVQPDLYQAMVTAALQDMRTVDSSKIGSQSLLQCQQNQSTSTGLP
ALVQRQMLQQSQTQNGFLPSFQENQTASQVQLLQQLQCPNLYSDQRQKQQQQQSQETQQL
PPVPQQISNVIPAFPSVSANQAQSSLPAVDSQCQQSTFSDHLGNSVATSDVSSMQSILGS
LSQMGASHLLNLNGSNPILSSSTFLSKPAAIEPRLSSGMANSVLPQVEQLGTAQSNASEP
NNLLPPFPGREYSAYHNATDPQNNLLFGVSIDSSSLMLHHGMTNPKSIRNENDSMSLPYA
ASNFTSASGTDFPLNSDMTTSSCVDESGYLQSSENVDQVNPPTGTFVKVHKSGSFGRSLD
ISKFGSYDELRCELARLFGLEGQLEDPQRSGWQLVFVDRENDILLLGDDPWQEFVNNVWY
IKILSPLEVQQMGKGQNPATSIPNQRLNTTTTATTTSSNGNHCDDYMSRQDSRSSVASMG
SLEY
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgagactctcttcatcagggttgaatcagcaaactcaggaaggggagaagaaatgtttg
aattctgaactttggcatgcatgtgctggtcctttggtgtctcttccacctgttggaagc
cgagttgtttactttccacaaggtcatagtgaacaggttgctgcttctactaacaaggaa
gtagatgctcatataccgaactatccgagcttanccccacaacttatctgtcagcttcac
aatgtgaccatgcatgcagatgtggaaacagatgaagtgtatgctcaaatgaccttgcag
ccactgagtccacaagagcaaaaggatgtctacctactgcctgcagaactaggtgctccc
agcaaacagccaaccaattatttttgtaaaacactaacagcaagtgacactagcactcat
ggaggattctctgttccgcgccgtgctgctgagaaagtctttcctcctcttgactacacc
cagcaaccaccagctcaagagttgattgccagggatcttcatgacaatgagtggaaattt
agacatatatttcgaggtcagccaaagaggcatcttcttacaactgggtggagtgttttt
gtaagtgcaaagagactagttgccggtgactcagtcctttttatctggaatgataagaat
caattgttgttgggtatacggagagcaaaccgtcctcagactgttatgccttcttctgtt
ttatcaagtgatagcatgcacattggtcttcttgctgctgcagctcatgcggctgcaacc
aatagccgttttactatattttacaacccaagggctagtccttcagagtttgtcattcct
cttgccaagtatgttaaagctatctctcacacccggatttctgtaggcatgcggtttaga
atgctgtttgagacagaagagtcaagtgtccgacgatacatgggaacaataactggcatt
agttacttagatcctgttcgctggccaaattcgcattggcgctctgttaaggttggctgg
gatgaatccactgcaggagagaggcagccaagagtttccttgtgggaggttgaaccgtta
acaaccttccctatgtatccatctcccttccccctgcggctgaagcgaccatggccgtct
gcactaccctccttccatgctttcaaagacggtgatatgagcattaattcccaattgatg
tggcttcaaggtggggtcggggatcaaggacttcagtctttaaacttccaaggatttgga
gttgcaccttggatgcaaccaaggcttgatacttcttcaataccaggtgtacaacctgat
ctttaccaagcaatggtgactgcagcacttcaggatatgaggactgttgattcctccaaa
ataggctctcaatctctcttgcaatgccagcaaaaccagagcacatccactgggctgcct
gctctagttcagaggcaaatgttacaacagtcccaaacacaaaatgggtttcttccaagt
tttcaggagaatcagactgcttcacaggttcaacttctgcagcagttgcagtgccccaat
ttgtacagtgaccagcgacaaaagcagcagcagcaacagtctcaagaaacacagcaactg
ccacctgttccacagcagatttctaatgtaatccctgcttttccttctgtgtcagccaac
caagcgcagtcatctctgccagctgttgattcacaatgccagcagtcgacattttccgac
catcttgggaactctgtagctacatctgatgtttcttctatgcaaagcatcttaggttca
ttatcccagatgggagcttcccatttactcaacttgaatggatcaaacccaattctctct
tcttctactttcttgtccaagcctgcagctattgaaccacggctttcatccggaatggcc
aactctgtacttccccaggttgaacagttgggaactgcacaatcaaatgcatctgaacct
aacaacttattacctccatttcctggaagggagtattctgcttaccacaatgcaactgat
ccacagaacaatcttctctttggggttagcattgattcctcgtctcttatgctgcatcat
gggatgacaaacccgaaaagcatcagaaatgagaatgattcgatgtcccttccgtacgct
gcttcaaatttcacaagtgcttctggcacagattttcctcttaattcagacatgactacc
tcaagttgtgtcgatgaatcaggttacttgcagtcctctgaaaatgtggaccaagtaaac
cctccaactggaacctttgtcaaggttcacaagtcggggtcctttgggcgctcattggat
atttccaagtttggcagctatgatgagctgcgctgtgagcttgctcgactatttggcctt
gaaggccaattagaggaccctcagagatcaggctggcagcttgtatttgttgacagggag
aacgatattcttctccttggtgatgacccatggcaggaattcgtgaacaatgtgtggtat
atcaagatactatccccacttgaagtacaacaaatggggaaaggtcagaatcctgctact
tctattccgaaccaaaggcttaacaccaccaccaccgctaccaccaccagcagcaatggc
aaccactgtgatgactacatgagcagacaggactcgagaagttctgttgcatcaatgggg
tctcttgaatactaa
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