Gossypium hirsutum (upland cotton): 107888509
Help
Entry
107888509 CDS
T04793
Name
(RefSeq) protein CHROMATIN REMODELING 24-like isoform X1
KO
K20093
DNA excision repair protein ERCC-6-like [EC:5.6.2.-]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ghi03036
]
107888509
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
107888509
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
AAA_34
HDA2-3
GCOM2
Motif
Other DBs
NCBI-GeneID:
107888509
NCBI-ProteinID:
XP_016668128
UniProt:
A0A1U8HW01
LinkDB
All DBs
Position
A09:1091643..1107174
Genome browser
AA seq
1063 aa
AA seq
DB search
MADKEESNIRKAVSLNDSHYRFLHDLSAPPKPKPTKEESEEEEFQVRRRLCKQSHTDDSI
PGFSEITDFDSPLEDEAKPVKVKIEGRRRLCKVSSRDGGGADKTSIANEPKLSGICDFDS
PLQTKNVCEGGSQIRDILNDLSSKLELMSIEKKTAPKRNIPEYASAESSFSSMSDPSDTS
SGSSKNVGGGVQDVVDLCEDDVYEEESKKLNVKLVSARQVFDSNVEEKEEKSESQSDFGN
ATFVTRVHESKKNFQRLKKNEPKNAYERLMSVGRSFASKHGEKEDDNDCAVLSSKQGFNE
AVKCGGNLKKSDQSEEADELDDSYSSEADQPFILSGPNSTFKLPTKVAKMLYLHQREGLK
WLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSKLIKRALIVAPKTLLSHWIKELSV
VGLSGKTREYFATSAKTRQYELEDVLQNQGILLTTYDIVRNNSKALKGESYYRDDDEDED
DIIWDYMILDEGHLIKNPSTQRAKSLLDIPSAHRIVISGTPIQNNLKELWALFNFCCPEL
LGDNKWFKERYEHAILCGNDKNASEREKRVGSMVAKELRERIQPYFLRRLKKEVFGEDDT
STAKLSKKNEIIVWLKLTACQRRLYEAFLNSEIVLSAFDGSPLAALTILKKICDHPLLLT
KRAAEDVLEGMDSMLNPEDASVAEKLAMHVADVAETNDFQDNHNNLSCKISFLLSLLDTL
IPEGHHVLIFSQTRKMLNHIQESLVLNDYKFLRIDGTTKASDRVKIVNDFQEGNGAPIFL
LTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQTKDVLVYRLMTCGTVEEK
IYRKQIYKGGLFKTATEHKEQIRYFSQQDLRELFSLPKQGFDISLTQKQLHEEHDSQHKM
DELLETHIKFLETLGIAGVSHHSLLFSKTAPVQVVEEEDEDIRKKENMVVRHSSSSSSVE
QKPDGAVYAFKPKDIMMSRKSLSPIEVAKLTESEIKQRINRLSQIYANKITISRLPDKGA
KIEKQIAELNAELQKMKTAEVTQKETEVGVDDITGQLQKVLNV
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaaagaggagagcaacattcgaaaggctgtaagcttaaacgacagccattac
cgtttccttcacgatctttctgcacctcccaaacccaaacccaccaaagaagagtctgaa
gaggaggaattccaagttcggcgtcgtctttgcaaacaatcccatacagatgattctatt
cctggcttctctgaaatcaccgattttgattctcctcttgaagatgaagcaaagcctgta
aaggtgaagattgagggtaggcgtcgtttgtgcaaagtctcatctcgagatggcgggggt
gctgataaaacctctattgccaatgaacctaaactttctggaatttgtgattttgattca
cctttgcaaacgaagaatgtttgtgagggtggaagtcaaattagagatattttaaatgac
ttgagctctaagcttgagcttatgtctatagagaaaaagacagctcctaaaaggaatatt
ccagaatatgctagtgccgagtcttcattttccagtatgtctgatccatctgatacctca
tcaggttcgagtaagaatgttggaggtggtgttcaggatgtagttgatttgtgtgaagat
gatgtttatgaagaagagtcaaaaaaacttaatgtcaaattggtgtctgcaaggcaggtt
tttgattcaaatgttgaagaaaaagaagaaaagagtgaatcacagagtgactttgggaat
gccacttttgttactagggtacatgaatctaagaaaaacttccaaaggcttaagaagaat
gaacctaagaatgcatatgagcgattgatgtctgtgggtaggtcatttgcatcaaaacat
ggagaaaaagaggatgacaatgattgtgcagtattgagttcaaagcaaggatttaatgaa
gctgttaaatgtggtggtaacttgaagaagtctgatcagtccgaggaagctgatgagctt
gatgattcatactcatcagaagctgaccagccttttattttgagtggcccaaattcaacc
tttaagcttccaactaaagttgcaaaaatgttgtatctgcatcagcgcgagggcttgaaa
tggctttggtctttgcattgtcagggtaagggtggaatcttaggggatgatatgggcctg
ggaaaaacaatgcagatttgtggctttctagcaggattgtttcattcaaagttgattaaa
agagctttaatagttgccccgaaaacattgctctctcattggatcaaagaactctcggtt
gtagggctttctgggaagaccagagagtactttgcgacttctgctaaaactcggcaatat
gagctcgaagatgtgcttcagaaccaagggattcttcttacaacatatgatattgtacga
aacaattctaaagctttgaaaggagaaagctactaccgtgatgatgatgaggatgaggat
gatatcatatgggactatatgattcttgatgagggccatctcataaaaaatcctagcaca
caaagggcaaagagtttacttgatataccaagtgctcatcgtatagtcataagtggcaca
ccaattcagaataatctaaaggaactgtgggccttgttcaacttctgttgtcctgagcta
ctcggtgataataaatggttcaaggaaagatatgagcatgctattttatgtggaaatgac
aaaaatgcttctgagagggaaaagcgtgttggctcaatggttgccaaggagctaagagaa
cgtattcaaccttactttttgcgccggttaaagaaagaggtatttggtgaagatgatacg
tcaactgccaagctttctaagaaaaatgagatcattgtgtggttaaagttgactgcttgc
cagcgacggttgtacgaagcttttttgaatagtgagatagttctttcagcttttgatggc
tcgcctctagctgcattgacgattcttaaaaaaatatgtgatcatccacttctcttgaca
aagagagctgctgaggatgtactagaagggatggattcaatgctaaatccagaagatgct
agtgtcgctgaaaaattggcaatgcatgttgctgatgttgctgaaacgaatgactttcaa
gataatcacaacaatctctcatgcaaaatatcctttttactttcacttttggacacttta
attccagagggccaccatgttcttatattttctcaaactcgtaaaatgctcaatcatatt
caggagtctctagtgttaaacgactacaaatttttacgtattgatggtaccacgaaagca
agtgatagagtgaagattgttaatgattttcaagaaggtaatggggctcctatatttctt
ctgacatcccaagttggtggtctaggccttacacttacaaaagcagatcgtgtcattgtg
gtcgatcctgcttggaacccaagcacggataatcaaagtgttgatcgggcatatcgaatt
gggcaaacgaaggatgtccttgtgtacaggttgatgacctgtggaactgttgaagaaaag
atatacagaaagcagatatacaagggggggttatttaagacggcaactgagcacaaagaa
cagattcgctacttcagccagcaggatcttcgagaactttttagtcttccgaaacagggg
tttgacatttcactcacccaaaagcaattacatgaagagcatgatagtcaacataaaatg
gatgagttattggaaacccacataaaattcctggaaacactgggaatagcaggagttagt
catcacagtctacttttctctaaaacagcacctgtacaagttgtagaggaagaagatgaa
gacatacggaaaaaagaaaatatggtcgtgcgacattcatcttcaagttcttctgttgaa
cagaaacctgatggggctgtatatgctttcaagccaaaggatatcatgatgagcaggaaa
agcttgtcgcctattgaagtagctaaattaactgagagtgaaattaaacaaagaattaac
cgtctgtcccaaatatatgctaataagattacgatttcgaggttgcctgataagggagcc
aagatagaaaagcagattgctgaactgaatgcagagctccaaaagatgaagacagcagag
gtaactcaaaaagaaactgaagtaggtgtagatgatataactggacaactccagaaagtg
ttaaatgtatag
DBGET
integrated database retrieval system
