Gossypium hirsutum (upland cotton): 107888555
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Entry
107888555 CDS
T04793
Name
(RefSeq) chaperone protein ClpB3, chloroplastic
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
ghi03110
]
107888555
Chaperones and folding catalysts [BR:
ghi03110
]
Heat shock proteins
HSP100
107888555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
Clp_N
ClpB_D2-small
AAA
AAA_5
AAA_16
AAA_22
Sigma54_activat
nSTAND3
AAA_14
AAA_18
IstB_IS21
Zeta_toxin
AAA_7
TniB
AAA_28
RNA_helicase
Mg_chelatase
AAA_24
NACHT
ResIII
AAA_25
ABC_tran
NBD_SMAX1
ABC_tran_CTD
KIF9
Torsin
APG6_N
Laminin_II
Motif
Other DBs
NCBI-GeneID:
107888555
NCBI-ProteinID:
XP_016668197
UniProt:
A0A1U8HQ81
LinkDB
All DBs
Position
A09:2740663..2746123
Genome browser
AA seq
978 aa
AA seq
DB search
MAASSSTTSMASVNGFSLCATRSVSNINNLLLTHPRLSLSFPSKPNSLKSFKPLQLRKNG
VFERFSRTSSRPFVVRCEASTGKITQQDFTEMAWQAIVSSPDVAKENKHQIVETEHLMKA
LLEQKNGLARRIFLKVGVDNTRLLEATDKFIQRQPKVLGESAGSMLGRDLEALIQRAREY
KKEYGDSFVSVEHLVLGFTQDRRFGKQLFKDFQISNQALKSAIESIRGRQSVTDQDPEGK
YEALEKYGKDLTAMAREGKLDPVIGRDDEIRRCIQILSRRTKNNPVLIGEPGVGKTAISE
GLAQRIVQGDVPQALMNRKLISLDMGALIAGAKYRGEFEDRLKAVLREVTDSEGQIILFI
DEIHTVVGAGATNGAMDAGNLLKPMLGRGELRCIGATTLDEYRKYIEKDPALERRFQQVY
VDQPTVEDTISILRGLRERYELHHGVRISDSALVEAAILSDRYISGRFLPDKAIDLVDEA
AARLKMEITSKPTALDEINRSVLKLEMERLSLTNDTDKASRDRLSRLEAELALLKERQSE
LTEQWEHEKSVMTNIQSIKEEIDRVNVEIQQAEREYDLNRAAELKYGSLNSLQRQLAEAE
KELDEYMKSGKSMLREEVTGNDIAEVVSKWTGIPVSKLQQSEREKLLYLEEVLHKRVVGQ
DPAVRSVAEAIQRSRAGLSDPRRPIASFMFMGPTGVGKTELAKALASYLFNTEEALVRID
MSEYMEKHAVSRLIGAPPGYVGYEEGGQLTETVRRRPYAVILFDEIEKAHGDVFNVFLQI
LDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNSDEDTPKDLAYETIKQRVMEAARAIF
RPEFMNRVDEYIVFQPLDREQINSIVRLQLERVQNRIADRKIKLQVTDSAVELLGNLGYD
PNYGARPVKRVIQQNVENELAKGILRGEFKDEDTILVDTELTAFANGQLPQQKLVFKKLD
NDSDTQATGSQEALSQTV
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atggcggcttcttcttctactacttcaatggcgtctgttaatggtttcagtttatgtgct
acacgttctgtttctaatataaacaatctccttttaactcacccacgcctttctttgagc
tttccttcaaaacccaattcattgaaatcctttaaaccacttcagttaaggaaaaatggg
gtttttgagaggttttcaaggacttcttcaaggcctttcgttgttcgttgtgaagcttca
actgggaagattacacaacaggacttcactgaaatggcctggcaagccattgtttcttca
ccagatgtggctaaagagaacaagcatcaaatagtggagactgaacacttgatgaaagct
ctattggagcagaagaacggtcttgctcggcgaatatttttgaaagtcggagttgacaat
actcgccttcttgaagcgactgataagttcatccaacgccagccgaaggttttgggtgaa
tctgctggttcaatgttaggacgtgatttggaagcactgatccagcgagcaagagagtac
aaaaaggagtacggggattcgtttgtttctgtcgagcatttggttcttggatttacacaa
gatcggcgtttcgggaagcagttgttcaaggatttccagatatccaaccaagccttgaaa
tccgcaatagaatctattaggggacgtcagtcagttaccgaccaagaccccgaaggaaag
tatgaagcgttggagaagtatgggaaagatctaacagcaatggcgagagaaggaaagctt
gatccagttattggaagagatgatgaaatacgtaggtgcattcaaatcctttctaggagg
acaaagaacaaccctgtgctcattggtgaaccgggtgtcggtaaaactgcaatttctgaa
gggcttgcccaaagaatcgttcaaggggatgtccctcaggctttgatgaaccgtaagctt
atctcactcgacatgggtgcgctcatagctggggctaaatatcgaggagagtttgaagat
agactgaaggctgtacttcgagaagtcactgattcagaaggccaaattatcctcttcatt
gatgagattcacacagttgttggggcaggtgccaccaatggtgcaatggacgcaggcaat
ctgttgaagcctatgcttggtcggggagaactgcgatgtatcggggcaacgactctagat
gaatatcgtaaatacattgagaaagatcctgccctggaacgtcgtttccagcaggtttat
gttgatcaaccaacagtagaagatacaatttctatactccgggggcttcgtgagagatat
gagcttcatcatggagtacgtatttctgacagtgcactcgtggaggctgcaatcttgtct
gaccgttacattagtggccgatttttacctgacaaagctattgatttagttgatgaagca
gctgctagattgaaaatggaaatcacttcaaaacctactgccctcgatgagattaatcgt
tcggtactgaagttggaaatggagaggttgtctctcacaaatgatactgataaagcttca
agagatagactgagccgccttgaagctgagttggcgctcttaaaggagagacagtccgag
ttgactgaacagtgggagcatgagaagtctgtaatgacaaacattcagtcgatcaaggaa
gagattgatagggtcaatgttgagattcagcaggccgagcgggagtatgatctcaatcga
gctgctgagctgaagtacggaagtctgaactctttgcagcgccaacttgctgaagctgaa
aaagaattagatgagtatatgaaatctggaaaatcgatgctaagagaagaagttaccgga
aacgatattgccgaagtagttagtaaatggactggcataccggtttccaagcttcaacaa
tctgagagggagaaactattatatttagaagaagtgttgcataaacgtgtcgtaggtcaa
gatcctgctgtcagatccgtagctgaggccattcaacgatctcgagctggtctctcagat
ccccgtcgtccaattgccagtttcatgtttatgggtcctactggtgtagggaagacggaa
ctagctaaagcacttgcatcttacttgtttaatacggaagaagcacttgttcgaatcgat
atgagtgagtatatggaaaaacatgcggtttcaagacttataggtgctccacctggttat
gttgggtatgaagaaggaggacagctgacggaaacagttcgccggaggccctatgctgta
attctttttgatgagattgagaaagctcatggtgatgtatttaatgttttccttcaaatt
ttggatgatgggagagtcactgattcacaaggtcgtaccgtgagctttaccaacactgtc
atcattatgacttcgaatgtgggttcacaatacattctaaactcggacgaagacacacct
aaagacttagcttatgaaactatcaagcagagggtaatggaagctgcaagagctatcttt
cgacctgagttcatgaatcgtgttgacgagtatatagtgttccaacctttggaccgcgaa
caaataaacagtattgtgagattacagctggaacgtgtgcaaaataggattgcagatagg
aaaataaaacttcaggtaacagacagtgccgttgaacttctcggaaatcttggttatgat
ccaaattacggtgctagaccggtgaaacgagtgattcagcagaacgttgaaaacgaactt
gccaaaggcatattgagaggagagttcaaagatgaggatacgatcttagtagacaccgag
ctaactgcattcgcaaatggtcaactcccccagcaaaagctagtcttcaagaaactcgat
aatgattctgatactcaagcaactggcagtcaagaagctttatctcagactgtctga
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