Gossypium hirsutum (upland cotton): 107888572
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Entry
107888572 CDS
T04793
Name
(RefSeq) ARF guanine-nucleotide exchange factor GNL1-like isoform X1
KO
K18443
golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
107888572
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107888572
Membrane trafficking [BR:
ghi04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
107888572
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
Sec7-like_HUS
TPR_28
Sec7-like_HDS
Motif
Other DBs
NCBI-GeneID:
107888572
NCBI-ProteinID:
XP_040933566
LinkDB
All DBs
Position
A09:3144487..3150258
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AA seq
1460 aa
AA seq
DB search
MGDLITQSRKNGFNGELVNPCKGAFACMINSEIGAVLAVMRRNVRWGVRYVSDDEQLEHS
LIRSLKELRKQIFSWQHQWQNVDPVVYLLPFLDVIKSDETGAPITGVALSSIYKILTLDV
LDLDTVNVEEAMHLIVDAVTSCRFEVTDPASEEVVLMKILQVLLACMKSKAAPRLSNKHV
CMIANTCFQIVHQASSKGELLQRIARHTMHELIRCIFSHLPKIGSTEHEMSNGWSLSASG
VQVGTQNRNHVVGSTMVENGNVGIICDGPSSLSNASSPPMVKSGPETESSNFGESDGTEE
DAQRAEVLMSAPFGIPCMVEIFQFLCSLLNVIENIGIGPKSNPVAYDEDVPLFALGLINS
AIELGGPSFGKHPKLLAIIQDDLFRNLMQFGLSMSPLILSTVCSIVLNLYYHLRWELKVQ
LEAFFTYVLLKLVQSKHGSSYQQQEVAMEALVDLCRQQTFVAEMYANYDCDISCSNVFED
IANMLSKSAFPVNGPLSAMHILALDGLVSTVKGMTERIGYQLPIPNESSTDHEGYEAFWT
SKCQNYSDPSSWIPFVRKMKHFKRKLAIGADHFNRDPKKGLEFLQGIQLLPEKLDPESVA
SFFRYTVGLDKNLIGDFLGNHDEFCVQVLHEFVKTFNFKDMNLDSALRVFLGTFKLPGES
QKIQRVLEAFSERYYEQSPHILCNKDAALVLSYSLILLNTDQHNVQVKKKMTEEDFIRNN
RLINGGKDLPREYLSELFHSICENEIQMIPDQGAGVPVITSSRWINVVNKSKGSTPFIAC
DSRALLDHDMFTILSGPTIAALSVVFDQVEQEDVLEMCIDGFLAIAKLSAHYHFGDVLDD
LVVSLCKFMNLSTPLSIEEAIVSFGDDSRARMATKTVFTIANSYGDCIHSGWTNILDCVL
SLHKLNLLPACLASDTADETESSSDHERGKPATSSLRRLKTAPAAIPRKSSSLIGRFSQF
LSFDIEEPTLYPTEEELAAQRHLREIVQECHVDNIFMESKFLQAESLLQLIEAIILAASR
FSKGTGVMEDEDTAVFCLELLIVITLNNRDRILIIWQKVYKHISDIVQQKAVPCALVEKA
VFGLLKICQRLLPYKENITDELLKSMQLILKLDARVADEYCEPITQEVMHLVKANATHIR
SHLGWRTIISLLYITARHPEASEFGFEALAFIMSEGAHLLPSNYVLCVDAAREFAESRVA
EVDRSISALDMMAGSVVCLVRWSYETKNAVEEEAAMKVSRDIGEMWLRLVQGLRAVCLDQ
REEVRNHAILMLQSSLGGVDGIQIPNAMWFQCFDHVIFTLMDDLLEIAQESSPKEYRKME
GTLVLATKLLSKAFLQSLQDLSQQPSFCKLWLGVLDRMERYMKVKFRGKRSEKIHELVPE
LLKNTLLVMKTTGILVPSDDLGGESFWQLTWLHVKNIVPSLQSEVFSEQELEQLQGKHLK
KTGIPSTDGAVLVPSNETAA
NT seq
4383 nt
NT seq
+upstream
nt +downstream
nt
atgggggatcttattacacaatctcgaaaaaatggatttaatggagaacttgtcaatccc
tgtaaaggtgcttttgcttgcatgattaattctgaaattggggctgtactggctgttatg
aggagaaatgttcggtggggagtccgctatgtttcagatgatgaacagcttgagcactct
cttatccgttccttgaaagaattgcggaaacaaattttttcgtggcaacatcagtggcaa
aatgttgacccggttgtttatctcctgccatttttggatgtaattaaatctgatgaaact
ggtgcgccaataactggtgttgccttgtcttccatttataagatcttgacccttgatgta
cttgatttggatactgtaaacgtggaagaagctatgcatcttatcgttgatgcagtgacg
agttgccgatttgaagtaactgatccagcatccgaagaagtggtactaatgaagatactt
caggttcttttagcttgcatgaaaagtaaagcagcacctaggttgagtaataagcatgta
tgcatgatagcaaatacatgctttcagattgttcatcaagcaagctccaaaggtgaactg
ttgcagcggatagctcggcatacaatgcatgaactaattaggtgtattttctctcatctt
cctaagattggcagcactgaacatgagatgtctaacggatggtcgttatctgcttcagga
gtgcaggtgggtacacagaacaggaaccatgtggttggaagtacaatggtagaaaatgga
aatgtgggtatcatttgtgatggtccatcctcccttagcaatgcttctagtcctccaatg
gtgaagtctggtcctgaaactgagtcaagcaactttggggaaagtgatggtacggaggag
gatgcccaacgtgctgaagtattgatgtcagcaccatttgggataccatgcatggtggag
atatttcaatttttgtgctctctgttaaatgtcattgaaaatataggtattgggcctaaa
tcgaatcctgtagcatatgatgaagatgttccgctctttgccctgggtttaattaattca
gcaatagaattgggtgggccatcattcggtaagcatcccaagttattggctataattcag
gatgacttgtttcgtaatctgatgcaatttggcttatccatgagccctcttattctttct
accgtatgtagcatcgttctcaacctgtattatcatttgcgctgggaactaaaagtgcag
cttgaagctttctttacatatgtgcttttgaagcttgttcaaagcaaacatgggtcttca
taccaacagcaggaagttgctatggaagctttggtcgacctttgcaggcagcagaccttt
gtggctgagatgtatgctaattatgattgtgacatatcctgcagtaatgtttttgaagac
attgccaacatgttgtcaaagagcgcatttcccgtgaatggacctttgtctgcaatgcat
atccttgctctggatggtttggtatctacggtaaagggtatgactgagagaatcggctat
caattgcctattccgaatgagtcatcgacagatcatgagggatatgaagctttctggaca
tcaaaatgtcagaattacagtgaccctagttcttggattccttttgtccgtaaaatgaag
cacttcaagagaaagttggcaattggagctgaccattttaatcgagatcccaagaaaggt
ctggaatttctccaaggaatccagctattaccagagaagcttgacccagaaagtgtagca
tcattctttaggtacacagttgggttagataagaatcttatcggagattttctgggaaac
catgatgaattttgtgttcaggtgcttcatgaatttgtcaagaccttcaattttaaagac
atgaatctggattcagcattacgggttttcttgggaactttcaaattgcccggagaatca
cagaagatacagagagtgttagaggctttttctgaaagatattatgagcaatcgccacat
atattgtgtaacaaagatgctgcccttgtgttgtcatattcacttatattgctcaataca
gatcaacacaatgtacaggttaagaaaaagatgactgaagaagattttatccgtaacaat
cgactcatcaatggggggaaagatcttcctcgagagtacttgtctgagcttttccactca
atctgtgagaacgaaattcaaatgatcccagaccaaggtgctggtgtcccagtaataaca
tcaagccgctggattaatgtggtgaacaaatccaaaggaagcaccccttttattgcctgc
gattccagagcactccttgaccatgatatgtttactattctttccggtcccacaattgca
gctttgtccgtggttttcgatcaagtggaacaagaagatgtcttagaaatgtgcattgat
ggattcttggccattgccaaactttcagcgcactatcattttggtgatgtattggatgat
ttggttgtgtctctttgtaaatttatgaacctctcaactccattgtctattgaagaggcc
attgtttccttcggagatgattcacgagctaggatggcaaccaaaacagttttcacaata
gcaaatagttatggtgattgcatccacagtggctggacgaacatattggattgtgtctta
agcttgcacaagctcaacctcctgcctgcctgtctagctagtgacacagctgatgaaacc
gagtcctcgtctgaccacgagcggggtaagcctgctactagttctttacgaagattgaag
acagcacctgcggccattccccggaaatcttcaagcctgattggtcggttcagtcaattc
ctatcctttgatattgaggagccgacattgtacccaaccgaggaagagctcgctgctcaa
cggcaccttcgtgagatagtgcaggaatgccacgttgataatatattcatggagagcaag
tttctccaagcagagtctttattgcagctcatcgaggccattatcttggctgcaagtcgt
ttcagcaagggaactggggtcatggaagatgaagacactgctgtgttctgcctggagttg
ctgatagttatcacactaaataaccgggatagaattttgataatctggcaaaaggtatac
aagcacatatcagatattgtccagcagaaggcagtaccatgtgcgctagttgaaaaagct
gtgtttgggctccttaagatatgccagcgcttgcttccttacaaggaaaatataaccgac
gaacttctaaagtccatgcaactaatattgaaacttgatgctcgggttgctgatgagtat
tgtgaacctatcacacaagaagtcatgcatctcgtgaaagcaaacgccactcacatcaga
tcccatttgggttggcgcacaatcatttccttgctatatatcaccgctcgacatccagaa
gcatctgagtttggatttgaagcactagcattcatcatgtctgagggggcacaccttttg
ccatctaattatgttctttgtgtggacgcagcgagggagtttgccgagtctcgggttgca
gaggttgataggtcgatttctgccctagacatgatggcgggttcagttgtttgtcttgta
agatggtcttatgaaaccaagaatgctgtggaggaggaggctgctatgaaagtgagtcgg
gatattggagagatgtggctgaggttggtgcaaggactaagggcagtctgtttggaccag
agggaagaggtgcggaaccatgccattttaatgttgcagagttctttaggaggggtagat
ggaattcagattccaaatgctatgtggttccagtgttttgatcatgtgatttttacgtta
atggatgatttgctagaaattgcacaggagagctccccaaaagaataccggaaaatggag
ggtacccttgtcttagctacaaaattactgtcaaaagctttcttacagtcactgcaggat
ttgtcacagcaaccatccttctgcaaactatggcttggggttcttgatcgtatggagaga
tacatgaaagtcaagttccgaggaaaacgtagcgaaaaaattcatgaattagtccctgag
cttctcaagaacacactgctggtgatgaaaacaacgggtattcttgtgccgagtgatgat
ctgggtggagagagtttttggcaactgacatggctgcatgtgaagaacattgtcccatct
ttgcaatccgaagtgttctcggaacaagaactggagcagttacaaggaaaacatctaaag
aaaactggaattccttcgactgatggggcagtgctggttccatcaaatgaaacagcagct
tga
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